Cladopus chinensis (cladopus_chinensis)
Imported from atlas release summary for Cladopus chinensis.
930
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
930
Candidate Genes
POD
6.52%
4CL
5.85%
C3'H/CYP98A
5.63%
BAHD
5.63%
C4H
5.1%
T3O
3.59%
NMT
3.15%
IFS
2.88%
Other Families
61.66%
More Families (94)
7DLGT
62
2.75%
CYP76
60
2.66%
UGT
60
2.66%
UFGT
59
2.62%
CYP71
58
2.57%
IFR
57
2.53%
F3H
51
2.26%
F3'H/CYP75B
47
2.08%
STR
43
1.91%
BR6OX2/CYP85A2
39
1.73%
DWF4/CYP90B1
35
1.55%
GS
33
1.46%
LAC
33
1.46%
CODM/T6ODM
32
1.42%
PYKS
32
1.42%
CSE
30
1.33%
TRI/TRII
29
1.29%
CAS
27
1.2%
H6H
23
1.02%
SMT1/SMT2/SMT3
23
1.02%
CAD
22
0.98%
CYP90D1
22
0.98%
CPD/CYP90A1
20
0.89%
SGD
18
0.8%
PAL
18
0.8%
BBE
17
0.75%
CHS
16
0.71%
SLS
15
0.66%
COMT
15
0.66%
CNMT
14
0.62%
FPPS
14
0.62%
G8O/G8H
13
0.58%
FNS
13
0.58%
ANR
13
0.58%
AACT
13
0.58%
GGPPS
13
0.58%
T16H
11
0.49%
CCR
11
0.49%
MCT/IspD
11
0.49%
8HGO
10
0.44%
DFR
10
0.44%
CPR
10
0.44%
RAS
10
0.44%
CYP51G1
10
0.44%
ADC
9
0.4%
NCS
9
0.4%
7DLH
8
0.35%
F3'5'H/CYP75A
8
0.35%
HCT
8
0.35%
TAT
8
0.35%
SQS/FDFT1
8
0.35%
DET2
8
0.35%
PMT
7
0.31%
MPO
7
0.31%
DXS
7
0.31%
IO
6
0.27%
GES
6
0.27%
F5H/CYP84A
6
0.27%
BR6OX1/CYP85A1
6
0.27%
CMK/IspE
6
0.27%
HDR/IspH
6
0.27%
16OMT
5
0.22%
TYDC_DDC
5
0.22%
ROT3/CYP90C1
5
0.22%
TPS
5
0.22%
DXR
5
0.22%
COR
4
0.18%
CYP719
4
0.18%
CCoAOMT
4
0.18%
MDS/IspF
4
0.18%
HDS/IspG
4
0.18%
IDI
4
0.18%
CYP80B1
3
0.13%
TDC
3
0.13%
ISY
3
0.13%
CHI
3
0.13%
ANS/LDOX
3
0.13%
SQE
3
0.13%
PMK
3
0.13%
LAMT
2
0.09%
FLS
2
0.09%
HPPR
2
0.09%
FK
2
0.09%
SMO1/SMO2
2
0.09%
CPI1
2
0.09%
DWF7
2
0.09%
DWF1
2
0.09%
MVK
2
0.09%
HMGR
2
0.09%
MVD
2
0.09%
ODC
1
0.04%
XMT_MXMT_DXMT
1
0.04%
HYD1
1
0.04%
GPPS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 253 | 19 | BAHD (100) | View species results |
| Phenylpropanoid pathway | 250 | 11 | POD (132) | View species results |
| Alkaloid pathway | 186 | 16 | NMT (38) | View species results |
| Flavonoid pathway | 120 | 9 | UFGT (54) | View species results |
| Rosmarinic acid pathway | 69 | 7 | 4CL (22) | View species results |
| Steroid pathway | 52 | 11 | CAS (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 764 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 145 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CLchi03G0003740.1 | Flavonoid | 4CL | medium | pass |
| CLchi03G0003750.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0005750.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0009800.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0011250.1 | Flavonoid | 4CL | low | borderline |
| CLchi06G0003350.1 | Flavonoid | 4CL | low | borderline |
| CLchi06G0008270.1 | Flavonoid | 4CL | medium | pass |
| CLchi08G0003830.1 | Flavonoid | 4CL | medium | pass |
| CLchi09G0001040.1 | Flavonoid | 4CL | medium | pass |
| CLchi09G0004410.1 | Flavonoid | 4CL | low | borderline |
| CLchi11G0008190.1 | Flavonoid | 4CL | low | borderline |
| CLchi12G0000400.1 | Flavonoid | 4CL | low | borderline |
| CLchi12G0002250.1 | Flavonoid | 4CL | medium | pass |
| CLchi12G0003120.1 | Flavonoid | 4CL | medium | pass |
| CLchi12G0004360.1 | Flavonoid | 4CL | medium | pass |
| CLchi12G0005370.1 | Flavonoid | 4CL | medium | pass |
| CLchi13G0003570.1 | Flavonoid | 4CL | medium | pass |
| CLchi13G0003710.1 | Flavonoid | 4CL | medium | pass |
| CLchi13G0007050.1 | Flavonoid | 4CL | low | borderline |
| CLchi15G0001350.1 | Flavonoid | 4CL | medium | pass |
| CLchi15G0005610.1 | Flavonoid | 4CL | low | borderline |
| CLchi19G0002330.1 | Flavonoid | 4CL | low | borderline |
| CLchi19G0004680.1 | Flavonoid | 4CL | low | borderline |
| CLchi21G0002220.1 | Flavonoid | 4CL | medium | pass |
| CLchi21G0002350.1 | Flavonoid | 4CL | low | borderline |
| CLchi22G0000270.1 | Flavonoid | 4CL | low | borderline |
| CLchi24G0004810.1 | Flavonoid | 4CL | medium | pass |
| CLchi24G0004820.1 | Flavonoid | 4CL | medium | pass |
| CLchi25G0002640.1 | Flavonoid | 4CL | low | borderline |
| CLchi25G0002990.1 | Flavonoid | 4CL | low | borderline |
| CLchi25G0006590.1 | Flavonoid | 4CL | low | borderline |
| CLchi25G0007000.1 | Flavonoid | 4CL | medium | pass |
| CLchi26G0002820.1 | Flavonoid | 4CL | medium | pass |
| CLchi27G0004600.1 | Flavonoid | 4CL | medium | pass |
| CLchi28G0001960.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000000770001940.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000001040002760.1 | Flavonoid | 4CL | medium | pass |
| CLchiGWHACFD000001040003280.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000001590008460.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000002440011510.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000003240017540.1 | Flavonoid | 4CL | medium | pass |
| CLchiGWHACFD000004400025190.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000004450025700.1 | Flavonoid | 4CL | low | borderline |
| CLchiGWHACFD000004840027820.1 | Flavonoid | 4CL | low | borderline |
| CLchi01G0009960.1 | Flavonoid | ANR | low | borderline |
| CLchi02G0009290.1 | Flavonoid | ANR | medium | borderline |
| CLchi02G0009300.1 | Flavonoid | ANR | medium | borderline |
| CLchi04G0009170.1 | Flavonoid | ANR | medium | borderline |
| CLchi05G0008000.1 | Flavonoid | ANR | medium | borderline |
| CLchi06G0003210.1 | Flavonoid | ANR | medium | borderline |