Coix lacryma-jobi (coix_lacryma_jobi)
Imported from atlas release summary for Coix lacryma-jobi.
3180
Candidate Protein Records
2375
Pathway-Level Records
6306
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6306
Family-Level Calls
BAHD
6.09%
C4H
5.99%
C3'H/CYP98A
4.82%
POD
4.06%
4CL
3.9%
UGT
3.69%
CYP76
3.62%
7DLGT
3.38%
Other Families
64.45%
More Families (96)
UFGT
208
3.3%
T3O
177
2.81%
IFS
171
2.71%
NMT
166
2.63%
F3'H/CYP75B
142
2.25%
DWF4/CYP90B1
127
2.01%
STR
126
2.0%
CAS
125
1.98%
TPS
125
1.98%
F3H
123
1.95%
SMT1/SMT2/SMT3
119
1.89%
CAD
116
1.84%
BR6OX2/CYP85A2
116
1.84%
GES
97
1.54%
G8O/G8H
90
1.43%
SGD
84
1.33%
CYP71
79
1.25%
CCR
69
1.09%
CODM/T6ODM
67
1.06%
FNS
67
1.06%
COR
66
1.05%
H6H
65
1.03%
SLS
58
0.92%
IFR
57
0.9%
F5H/CYP84A
55
0.87%
TRI/TRII
54
0.86%
PAL
54
0.86%
PMT
53
0.84%
RAS
52
0.82%
PYKS
50
0.79%
T16H
48
0.76%
HCT
48
0.76%
LAC
48
0.76%
CSE
48
0.76%
ANR
46
0.73%
DFR
45
0.71%
NCS
40
0.63%
GS
38
0.6%
COMT
37
0.59%
8HGO
36
0.57%
CNMT
36
0.57%
CYP90D1
36
0.57%
CYP51G1
34
0.54%
CPD/CYP90A1
32
0.51%
BR6OX1/CYP85A1
31
0.49%
16OMT
29
0.46%
IO
29
0.46%
ANS/LDOX
28
0.44%
F3'5'H/CYP75A
26
0.41%
CHS
25
0.4%
BBE
21
0.33%
TAT
20
0.32%
MPO
19
0.3%
CYP80B1
19
0.3%
MVK
18
0.29%
AACT
17
0.27%
TYDC_DDC
16
0.25%
CPR
15
0.24%
HPPR
15
0.24%
FLS
14
0.22%
SQS/FDFT1
14
0.22%
CYP719
13
0.21%
ROT3/CYP90C1
13
0.21%
7DLH
12
0.19%
SMO1/SMO2
11
0.17%
FPPS
11
0.17%
XMT_MXMT_DXMT
8
0.13%
CCoAOMT
8
0.13%
MVD
8
0.13%
GGPPS
8
0.13%
DWF1
7
0.11%
MCT/IspD
6
0.1%
ODC
5
0.08%
HMGS
5
0.08%
PMK
5
0.08%
HDR/IspH
5
0.08%
LAMT
4
0.06%
HYD1
4
0.06%
HMGR
4
0.06%
TDC
3
0.05%
CYP80F1
3
0.05%
6OMT_4OMT_SOMT
3
0.05%
DET2
3
0.05%
DWF5
3
0.05%
CPI1
3
0.05%
DXS
3
0.05%
IDI
3
0.05%
ADC
2
0.03%
ISY
2
0.03%
CHI
2
0.03%
SQE
2
0.03%
FK
2
0.03%
DWF7
2
0.03%
CMK/IspE
2
0.03%
DXR
2
0.03%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 704 | 17 | BAHD (256) | View species results |
| Alkaloid pathway | 583 | 23 | 7DLGT (77) | View species results |
| Phenylpropanoid pathway | 417 | 11 | POD (184) | View species results |
| Flavonoid pathway | 299 | 13 | UFGT (182) | View species results |
| Steroid pathway | 196 | 16 | CAS (87) | View species results |
| Rosmarinic acid pathway | 176 | 7 | C4H (67) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2221 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 484 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| coix_lacryma-jobi_GWHPAAYR030819 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR032456 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR033532 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR033533 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR033534 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR033535 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR033937 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR033938 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR035647 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR035648 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR040521 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR040851 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR040852 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR040853 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR040854 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR041414 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR041758 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR042726 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR042736 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR044775 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR044968 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR046099 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR046100 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR046148 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR046304 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR047371 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047443 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047448 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047449 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047450 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047451 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047452 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047453 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047454 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047471 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047472 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047473 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047474 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR047475 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR048051 | Alkaloid | STR | medium | pass |
| coix_lacryma-jobi_GWHPAAYR048457 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR048458 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR049600 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR049601 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR050310 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR050311 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR051146 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR051160 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR052179 | Alkaloid | STR | low | borderline |
| coix_lacryma-jobi_GWHPAAYR052695 | Alkaloid | STR | low | borderline |