Corymbia citriodora (corymbia_citriodora)
Imported from atlas release summary for Corymbia citriodora.
3563
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3563
Candidate Genes
C3'H/CYP98A
5.82%
UGT
5.67%
C4H
5.59%
7DLGT
5.51%
UFGT
5.49%
BAHD
5.13%
IFS
3.84%
CYP76
3.64%
Other Families
59.31%
More Families (96)
T3O
259
3.28%
POD
249
3.16%
4CL
225
2.85%
DWF4/CYP90B1
207
2.62%
CAD
200
2.54%
F3H
193
2.45%
F3'H/CYP75B
150
1.9%
CAS
145
1.84%
TPS
145
1.84%
SMT1/SMT2/SMT3
143
1.81%
GES
142
1.8%
NMT
138
1.75%
CODM/T6ODM
114
1.45%
STR
110
1.39%
BR6OX2/CYP85A2
99
1.26%
LAC
89
1.13%
CSE
85
1.08%
HCT
77
0.98%
TRI/TRII
74
0.94%
GS
73
0.93%
CYP71
73
0.93%
COMT
72
0.91%
IFR
70
0.89%
H6H
68
0.86%
ANR
66
0.84%
CYP90D1
63
0.8%
PMT
62
0.79%
IO
61
0.77%
RAS
58
0.74%
TAT
57
0.72%
COR
53
0.67%
CPD/CYP90A1
52
0.66%
16OMT
50
0.63%
7DLH
49
0.62%
SLS
49
0.62%
SGD
46
0.58%
NCS
45
0.57%
G8O/G8H
44
0.56%
CCR
44
0.56%
CYP51G1
42
0.53%
LAMT
40
0.51%
BBE
39
0.49%
PYKS
36
0.46%
F3'5'H/CYP75A
35
0.44%
T16H
32
0.41%
PAL
30
0.38%
F5H/CYP84A
28
0.35%
FNS
27
0.34%
CCoAOMT
27
0.34%
8HGO
26
0.33%
BR6OX1/CYP85A1
23
0.29%
HPPR
18
0.23%
CNMT
17
0.22%
CYP719
15
0.19%
SQS/FDFT1
15
0.19%
ROT3/CYP90C1
13
0.16%
FPPS
13
0.16%
MPO
12
0.15%
DFR
12
0.15%
CPR
12
0.15%
SQE
12
0.15%
GGPPS
12
0.15%
CYP80B1
11
0.14%
CHS
11
0.14%
TYDC_DDC
10
0.13%
DET2
9
0.11%
HMGR
9
0.11%
DXS
8
0.1%
XMT_MXMT_DXMT
7
0.09%
SMO1/SMO2
7
0.09%
AACT
7
0.09%
ANS/LDOX
6
0.08%
MVD
6
0.08%
CHI
5
0.06%
MVK
5
0.06%
MCT/IspD
4
0.05%
TDC
3
0.04%
6OMT_4OMT_SOMT
3
0.04%
DXR
3
0.04%
PMK
3
0.04%
ISY
2
0.03%
CYP80F1
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
DWF7
2
0.03%
IDI
2
0.03%
HDR/IspH
2
0.03%
MDS/IspF
2
0.03%
HMGS
2
0.03%
ODC
1
0.01%
ADC
1
0.01%
DWF1
1
0.01%
CPI1
1
0.01%
HDS/IspG
1
0.01%
CMK/IspE
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1068 | 19 | UGT (421) | View species results |
| Alkaloid pathway | 789 | 22 | 7DLGT (225) | View species results |
| Phenylpropanoid pathway | 661 | 12 | POD (243) | View species results |
| Flavonoid pathway | 551 | 9 | UFGT (423) | View species results |
| Rosmarinic acid pathway | 277 | 7 | C4H (121) | View species results |
| Steroid pathway | 217 | 13 | SMT1/SMT2/SMT3 (97) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2797 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 540 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ccit01G0011390.3 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0013530.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit02G0016360.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit02G0025600.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025600.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025610.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025620.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025630.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025640.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit02G0025650.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025660.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit02G0025930.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit03G0006740.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit03G0012890.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit04G0012080.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit04G0013570.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit04G0013580.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009770.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009790.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009800.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009810.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009820.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009820.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit05G0009830.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit06G0003770.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit06G0003790.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit06G0003800.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit06G0003810.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit06G0014610.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit06G0014610.2 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit06G0014620.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit06G0015330.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit06G0015340.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit07G0002250.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit07G0020790.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit08G0010390.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit08G0020500.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit10G0000970.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit10G0007220.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit11G0008080.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccit11G0011180.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccit11G0011190.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccitscaffold13030007020.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccitscaffold23590023790.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccitscaffold26800027380.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccitscaffold26800027390.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Ccitscaffold29860029860.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccitscaffold8500054860.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Ccitscaffold8500054860.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |