Corymbia citriodora (corymbia_citriodora)
Imported from atlas release summary for Corymbia citriodora.
3563
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3563
Candidate Genes
C3'H/CYP98A
5.82%
UGT
5.67%
C4H
5.59%
7DLGT
5.51%
UFGT
5.49%
BAHD
5.13%
IFS
3.84%
CYP76
3.64%
Other Families
59.31%
More Families (96)
T3O
259
3.28%
POD
249
3.16%
4CL
225
2.85%
DWF4/CYP90B1
207
2.62%
CAD
200
2.54%
F3H
193
2.45%
F3'H/CYP75B
150
1.9%
CAS
145
1.84%
TPS
145
1.84%
SMT1/SMT2/SMT3
143
1.81%
GES
142
1.8%
NMT
138
1.75%
CODM/T6ODM
114
1.45%
STR
110
1.39%
BR6OX2/CYP85A2
99
1.26%
LAC
89
1.13%
CSE
85
1.08%
HCT
77
0.98%
TRI/TRII
74
0.94%
GS
73
0.93%
CYP71
73
0.93%
COMT
72
0.91%
IFR
70
0.89%
H6H
68
0.86%
ANR
66
0.84%
CYP90D1
63
0.8%
PMT
62
0.79%
IO
61
0.77%
RAS
58
0.74%
TAT
57
0.72%
COR
53
0.67%
CPD/CYP90A1
52
0.66%
16OMT
50
0.63%
7DLH
49
0.62%
SLS
49
0.62%
SGD
46
0.58%
NCS
45
0.57%
G8O/G8H
44
0.56%
CCR
44
0.56%
CYP51G1
42
0.53%
LAMT
40
0.51%
BBE
39
0.49%
PYKS
36
0.46%
F3'5'H/CYP75A
35
0.44%
T16H
32
0.41%
PAL
30
0.38%
F5H/CYP84A
28
0.35%
FNS
27
0.34%
CCoAOMT
27
0.34%
8HGO
26
0.33%
BR6OX1/CYP85A1
23
0.29%
HPPR
18
0.23%
CNMT
17
0.22%
CYP719
15
0.19%
SQS/FDFT1
15
0.19%
ROT3/CYP90C1
13
0.16%
FPPS
13
0.16%
MPO
12
0.15%
DFR
12
0.15%
CPR
12
0.15%
SQE
12
0.15%
GGPPS
12
0.15%
CYP80B1
11
0.14%
CHS
11
0.14%
TYDC_DDC
10
0.13%
DET2
9
0.11%
HMGR
9
0.11%
DXS
8
0.1%
XMT_MXMT_DXMT
7
0.09%
SMO1/SMO2
7
0.09%
AACT
7
0.09%
ANS/LDOX
6
0.08%
MVD
6
0.08%
CHI
5
0.06%
MVK
5
0.06%
MCT/IspD
4
0.05%
TDC
3
0.04%
6OMT_4OMT_SOMT
3
0.04%
DXR
3
0.04%
PMK
3
0.04%
ISY
2
0.03%
CYP80F1
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
DWF7
2
0.03%
IDI
2
0.03%
HDR/IspH
2
0.03%
MDS/IspF
2
0.03%
HMGS
2
0.03%
ODC
1
0.01%
ADC
1
0.01%
DWF1
1
0.01%
CPI1
1
0.01%
HDS/IspG
1
0.01%
CMK/IspE
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1068 | 19 | UGT (421) | View species results |
| Alkaloid pathway | 789 | 22 | 7DLGT (225) | View species results |
| Phenylpropanoid pathway | 661 | 12 | POD (243) | View species results |
| Flavonoid pathway | 551 | 9 | UFGT (423) | View species results |
| Rosmarinic acid pathway | 277 | 7 | C4H (121) | View species results |
| Steroid pathway | 217 | 13 | SMT1/SMT2/SMT3 (97) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2797 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 540 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ccit06G0030260.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit06G0033020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit07G0009180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit07G0012190.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit07G0018920.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit07G0020830.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit07G0021610.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0003770.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0005260.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0019810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0025870.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0026550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0026550.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0028530.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0028530.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit08G0031980.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit09G0000840.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit09G0003890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit09G0008870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002080.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002090.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002710.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002710.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0002720.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0003880.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0004450.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0004470.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0004480.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0004500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0005910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0013020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0013020.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0018290.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0018300.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Ccit10G0018310.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0018600.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0018610.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Ccit10G0018620.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0018630.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0018640.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ccit10G0020670.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0020680.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0020870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit10G0020870.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit11G0010340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit11G0016490.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit11G0020470.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit11G0021020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ccit11G0021020.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |