PlantSME Plant secondary metabolism enzyme database

Corymbia citriodora (corymbia_citriodora)

Imported from atlas release summary for Corymbia citriodora.

3563
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1068 19 UGT (421) View species results
Alkaloid pathway 789 22 7DLGT (225) View species results
Phenylpropanoid pathway 661 12 POD (243) View species results
Flavonoid pathway 551 9 UFGT (423) View species results
Rosmarinic acid pathway 277 7 C4H (121) View species results
Steroid pathway 217 13 SMT1/SMT2/SMT3 (97) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2797 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 540 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ccit08G0013110.1 Rosmarinic Acid 4CL medium pass
Ccit08G0017320.1 Rosmarinic Acid 4CL low borderline
Ccit08G0017320.2 Rosmarinic Acid 4CL low borderline
Ccit08G0019710.1 Rosmarinic Acid 4CL low borderline
Ccit08G0021560.1 Rosmarinic Acid 4CL low borderline
Ccit08G0031080.1 Rosmarinic Acid 4CL low borderline
Ccit08G0031080.2 Rosmarinic Acid 4CL low borderline
Ccit09G0004200.1 Rosmarinic Acid 4CL low borderline
Ccit09G0007270.1 Rosmarinic Acid 4CL medium pass
Ccit10G0012140.1 Rosmarinic Acid 4CL medium pass
Ccit10G0012140.2 Rosmarinic Acid 4CL medium pass
Ccit11G0003650.1 Rosmarinic Acid 4CL medium pass
Ccit11G0014250.1 Rosmarinic Acid 4CL low borderline
Ccit11G0024410.1 Rosmarinic Acid 4CL low borderline
Ccit11G0024760.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold13090007070.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold13090007080.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold22380022740.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold23520023680.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold31170030820.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold31980031190.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold31980031200.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold48340040680.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold8570055090.1 Rosmarinic Acid 4CL medium pass
Ccitscaffold8570055110.1 Rosmarinic Acid 4CL medium pass
Ccit01G0006380.1 Rosmarinic Acid C4H low borderline
Ccit01G0006390.1 Rosmarinic Acid C4H low borderline
Ccit01G0006400.1 Rosmarinic Acid C4H low borderline
Ccit01G0010990.1 Rosmarinic Acid C4H medium pass
Ccit01G0011000.1 Rosmarinic Acid C4H medium pass
Ccit01G0011000.2 Rosmarinic Acid C4H medium pass
Ccit01G0012920.1 Rosmarinic Acid C4H low borderline
Ccit01G0018840.1 Rosmarinic Acid C4H low borderline
Ccit01G0018850.1 Rosmarinic Acid C4H low borderline
Ccit01G0018880.1 Rosmarinic Acid C4H medium pass
Ccit01G0018890.1 Rosmarinic Acid C4H medium pass
Ccit01G0019770.1 Rosmarinic Acid C4H medium pass
Ccit01G0019780.1 Rosmarinic Acid C4H medium pass
Ccit01G0019790.1 Rosmarinic Acid C4H medium pass
Ccit01G0019800.1 Rosmarinic Acid C4H medium pass
Ccit01G0019810.1 Rosmarinic Acid C4H medium pass
Ccit01G0023250.1 Rosmarinic Acid C4H low borderline
Ccit02G0000510.1 Rosmarinic Acid C4H medium pass
Ccit02G0000520.1 Rosmarinic Acid C4H medium pass
Ccit02G0003200.1 Rosmarinic Acid C4H medium pass
Ccit02G0003480.1 Rosmarinic Acid C4H medium pass
Ccit02G0003500.1 Rosmarinic Acid C4H medium pass
Ccit02G0003710.1 Rosmarinic Acid C4H low borderline
Ccit02G0004920.1 Rosmarinic Acid C4H low borderline
Ccit02G0005010.1 Rosmarinic Acid C4H medium pass