Cucumis sativus (cucumis_sativus)
Imported from atlas release summary for Cucumis sativus.
1183
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1183
Candidate Genes
C4H
6.84%
BAHD
5.56%
C3'H/CYP98A
4.91%
UGT
4.44%
CYP76
4.25%
IFS
4.04%
4CL
4.04%
POD
3.85%
Other Families
62.07%
More Families (94)
7DLGT
102
3.71%
UFGT
101
3.67%
T3O
82
2.98%
F3H
74
2.69%
DWF4/CYP90B1
69
2.51%
NMT
62
2.25%
STR
48
1.75%
PAL
48
1.75%
CODM/T6ODM
43
1.56%
F3'H/CYP75B
39
1.42%
CAD
38
1.38%
H6H
36
1.31%
TPS
36
1.31%
CAS
35
1.27%
BR6OX2/CYP85A2
35
1.27%
TRI/TRII
32
1.16%
SMT1/SMT2/SMT3
32
1.16%
GES
31
1.13%
SGD
29
1.05%
HCT
29
1.05%
IFR
28
1.02%
CSE
27
0.98%
RAS
25
0.91%
G8O/G8H
23
0.84%
T16H
23
0.84%
F3'5'H/CYP75A
23
0.84%
LAC
22
0.8%
PMT
20
0.73%
BBE
20
0.73%
SLS
20
0.73%
GS
20
0.73%
CCR
20
0.73%
CYP90D1
20
0.73%
ANR
19
0.69%
COMT
19
0.69%
FNS
18
0.65%
TAT
18
0.65%
IO
17
0.62%
CYP71
17
0.62%
PYKS
16
0.58%
NCS
16
0.58%
16OMT
16
0.58%
CPD/CYP90A1
16
0.58%
F5H/CYP84A
15
0.55%
COR
14
0.51%
8HGO
13
0.47%
7DLH
12
0.44%
CYP719
11
0.4%
BR6OX1/CYP85A1
11
0.4%
CNMT
10
0.36%
CYP80B1
10
0.36%
LAMT
10
0.36%
ANS/LDOX
9
0.33%
DFR
9
0.33%
AACT
9
0.33%
MPO
8
0.29%
ROT3/CYP90C1
8
0.29%
HPPR
6
0.22%
FPPS
6
0.22%
CPR
5
0.18%
SQS/FDFT1
5
0.18%
GGPPS
5
0.18%
CHS
4
0.15%
CHI
4
0.15%
CYP51G1
4
0.15%
DXS
4
0.15%
MVD
4
0.15%
CCoAOMT
3
0.11%
SQE
3
0.11%
DET2
3
0.11%
MVK
3
0.11%
HMGR
3
0.11%
ISY
2
0.07%
TYDC_DDC
2
0.07%
ODC
2
0.07%
CPI1
2
0.07%
SMO1/SMO2
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
IDI
2
0.07%
HDR/IspH
2
0.07%
MCT/IspD
2
0.07%
ADC
1
0.04%
TDC
1
0.04%
FLS
1
0.04%
FK
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
HMGS
1
0.04%
PMK
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 364 | 19 | BAHD (122) | View species results |
| Alkaloid pathway | 243 | 21 | 7DLGT (45) | View species results |
| Phenylpropanoid pathway | 241 | 12 | POD (104) | View species results |
| Flavonoid pathway | 163 | 11 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (32) | View species results |
| Steroid pathway | 66 | 11 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1006 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 207 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CUsat04G0013760.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat04G0013770.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat04G0013780.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat04G0020190.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| CUsat04G0023300.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat04G0026810.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| CUsat04G0026900.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| CUsat05G0005550.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| CUsat05G0005560.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| CUsat05G0007790.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat05G0012390.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat05G0018940.1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| CUsat05G0024020.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| CUsat05G0024630.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat05G0028490.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| CUsat06G0002220.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0002570.1 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| CUsat06G0005830.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0007190.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0011830.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat06G0013650.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| CUsat06G0016210.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0016220.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0016230.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0016250.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0016260.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat06G0017260.1 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| CUsat06G0018520.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0021130.1 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| CUsat06G0022730.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| CUsat06G0023710.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| CUsat06G0025360.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| CUsat06G0026570.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| CUsat06G0029080.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0029950.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0032750.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat06G0032830.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| CUsat06G0033350.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| CUsat06G0033490.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| CUsat07G0000160.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| CUsat07G0001010.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| CUsat07G0003960.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat07G0004900.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| CUsat07G0005400.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat07G0005620.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat07G0005630.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat07G0011400.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| CUsat07G0017260.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| CUsat07G0019120.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| CUsat07G0019130.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |