Cucumis sativus (cucumis_sativus)
Imported from atlas release summary for Cucumis sativus.
1183
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1183
Candidate Genes
C4H
6.84%
BAHD
5.56%
C3'H/CYP98A
4.91%
UGT
4.44%
CYP76
4.25%
IFS
4.04%
4CL
4.04%
POD
3.85%
Other Families
62.07%
More Families (94)
7DLGT
102
3.71%
UFGT
101
3.67%
T3O
82
2.98%
F3H
74
2.69%
DWF4/CYP90B1
69
2.51%
NMT
62
2.25%
STR
48
1.75%
PAL
48
1.75%
CODM/T6ODM
43
1.56%
F3'H/CYP75B
39
1.42%
CAD
38
1.38%
H6H
36
1.31%
TPS
36
1.31%
CAS
35
1.27%
BR6OX2/CYP85A2
35
1.27%
TRI/TRII
32
1.16%
SMT1/SMT2/SMT3
32
1.16%
GES
31
1.13%
SGD
29
1.05%
HCT
29
1.05%
IFR
28
1.02%
CSE
27
0.98%
RAS
25
0.91%
G8O/G8H
23
0.84%
T16H
23
0.84%
F3'5'H/CYP75A
23
0.84%
LAC
22
0.8%
PMT
20
0.73%
BBE
20
0.73%
SLS
20
0.73%
GS
20
0.73%
CCR
20
0.73%
CYP90D1
20
0.73%
ANR
19
0.69%
COMT
19
0.69%
FNS
18
0.65%
TAT
18
0.65%
IO
17
0.62%
CYP71
17
0.62%
PYKS
16
0.58%
NCS
16
0.58%
16OMT
16
0.58%
CPD/CYP90A1
16
0.58%
F5H/CYP84A
15
0.55%
COR
14
0.51%
8HGO
13
0.47%
7DLH
12
0.44%
CYP719
11
0.4%
BR6OX1/CYP85A1
11
0.4%
CNMT
10
0.36%
CYP80B1
10
0.36%
LAMT
10
0.36%
ANS/LDOX
9
0.33%
DFR
9
0.33%
AACT
9
0.33%
MPO
8
0.29%
ROT3/CYP90C1
8
0.29%
HPPR
6
0.22%
FPPS
6
0.22%
CPR
5
0.18%
SQS/FDFT1
5
0.18%
GGPPS
5
0.18%
CHS
4
0.15%
CHI
4
0.15%
CYP51G1
4
0.15%
DXS
4
0.15%
MVD
4
0.15%
CCoAOMT
3
0.11%
SQE
3
0.11%
DET2
3
0.11%
MVK
3
0.11%
HMGR
3
0.11%
ISY
2
0.07%
TYDC_DDC
2
0.07%
ODC
2
0.07%
CPI1
2
0.07%
SMO1/SMO2
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
IDI
2
0.07%
HDR/IspH
2
0.07%
MCT/IspD
2
0.07%
ADC
1
0.04%
TDC
1
0.04%
FLS
1
0.04%
FK
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
HMGS
1
0.04%
PMK
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 364 | 19 | BAHD (122) | View species results |
| Alkaloid pathway | 243 | 21 | 7DLGT (45) | View species results |
| Phenylpropanoid pathway | 241 | 12 | POD (104) | View species results |
| Flavonoid pathway | 163 | 11 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (32) | View species results |
| Steroid pathway | 66 | 11 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1006 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 207 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CUsat05G0006160.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| CUsat05G0006190.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CUsat05G0006210.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| CUsat05G0006220.1 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| CUsat05G0006520.1 | Terpenoid | CYP76 | medium | pass | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| CUsat05G0006530.1 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| CUsat05G0006540.1 | Terpenoid | CYP76 | medium | pass | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| CUsat05G0006550.1 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| CUsat05G0006560.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| CUsat05G0006570.1 | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| CUsat05G0007440.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| CUsat05G0008690.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| CUsat05G0008700.1 | Terpenoid | CYP76 | medium | pass | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |
| CUsat05G0008710.1 | Terpenoid | CYP76 | medium | pass | CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF |
| CUsat05G0010980.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| CUsat05G0012040.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| CUsat05G0021240.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| CUsat05G0021820.1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| CUsat05G0021850.1 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| CUsat05G0021860.1 | Terpenoid | CYP76 | low | borderline | CYP76__00017__sp_Q14T82_C76B9_PETHY |
| CUsat05G0024420.1 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| CUsat05G0026550.1 | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| CUsat06G0000300.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0000640.1 | Terpenoid | CYP76 | low | borderline | CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF |
| CUsat06G0004230.1 | Terpenoid | CYP76 | medium | pass | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| CUsat06G0007880.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0007890.1 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| CUsat06G0007900.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0009460.1 | Terpenoid | CYP76 | medium | pass | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| CUsat06G0011620.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| CUsat06G0020580.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| CUsat06G0028300.1 | Terpenoid | CYP76 | low | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| CUsat06G0028310.1 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| CUsat06G0028340.1 | Terpenoid | CYP76 | low | borderline | CYP76__00017__sp_Q14T82_C76B9_PETHY |
| CUsat06G0029610.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0029620.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0029650.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0031940.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| CUsat06G0031950.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CUsat06G0032920.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat06G0035240.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| CUsat06G0037890.1 | Terpenoid | CYP76 | low | borderline | CYP76__00005__sp_A0A125QZE2_C76K1_SALMI |
| CUsat07G0000280.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| CUsat07G0003600.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| CUsat07G0008380.1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| CUsat07G0018250.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| CUsat07G0020120.1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| CUsat01G0001550.1 | Terpenoid | DXR | high | pass | DXR__00001__sp_Q9XFS9_DXR_ARATH |
| CUsat01G0019950.1 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |
| CUsat02G0024230.1 | Terpenoid | DXS | medium | pass | DXS__00001__sp_Q38854_DXS_ARATH |