PlantSME Plant secondary metabolism enzyme database

Diospyros oleifera (diospyros_oleifera)

Imported from atlas release summary for Diospyros oleifera.

1796
Candidate Protein Records
1485
Pathway-Level Records
3615
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.02% Alkaloid pathway 22.76% Phenylpropanoid pathway 21.75% Flavonoid pathway 13.54% Rosmarinic acid pathway 8.01% Steroid pathway 4.92%
Family Distribution
C4H 6.14% C3'H/CYP98A 5.42% BAHD 5.03% UGT 4.45% 7DLGT 4.01% UFGT 3.93% POD 3.71% IFS 3.54%
Other Families 63.76%
More Families (95)
CYP76 126 3.49% T3O 115 3.18% 4CL 108 2.99% F3H 104 2.88% CODM/T6ODM 78 2.16% F3'H/CYP75B 76 2.1% STR 74 2.05% BR6OX2/CYP85A2 72 1.99% NMT 67 1.85% CAD 66 1.83% TPS 66 1.83% DWF4/CYP90B1 65 1.8% COMT 54 1.49% GES 52 1.44% 16OMT 49 1.36% TRI/TRII 48 1.33% CAS 47 1.3% CSE 46 1.27% H6H 42 1.16% LAC 39 1.08% PYKS 38 1.05% SMT1/SMT2/SMT3 38 1.05% CYP71 36 1.0% SGD 35 0.97% IFR 34 0.94% IO 33 0.91% CYP90D1 32 0.89% BBE 28 0.77% DFR 27 0.75% GS 26 0.72% SLS 25 0.69% ANR 25 0.69% HCT 25 0.69% NCS 23 0.64% RAS 23 0.64% T16H 21 0.58% CCR 20 0.55% G8O/G8H 18 0.5% PMT 18 0.5% 8HGO 17 0.47% ANS/LDOX 17 0.47% F5H/CYP84A 17 0.47% 7DLH 16 0.44% TAT 16 0.44% BR6OX1/CYP85A1 16 0.44% CYP51G1 16 0.44% PAL 15 0.41% F3'5'H/CYP75A 14 0.39% CHS 14 0.39% CPD/CYP90A1 14 0.39% COR 13 0.36% CPR 12 0.33% AACT 12 0.33% CCoAOMT 11 0.3% MPO 10 0.28% ROT3/CYP90C1 10 0.28% FNS 9 0.25% TYDC_DDC 8 0.22% GGPPS 8 0.22% FPPS 8 0.22% CYP80B1 7 0.19% CNMT 7 0.19% HPPR 7 0.19% MVK 6 0.17% HMGR 6 0.17% TDC 5 0.14% CYP719 5 0.14% SQS/FDFT1 5 0.14% SQE 5 0.14% DXS 5 0.14% ISY 4 0.11% LAMT 4 0.11% XMT_MXMT_DXMT 4 0.11% DET2 4 0.11% HMGS 4 0.11% 6OMT_4OMT_SOMT 3 0.08% CHI 3 0.08% SMO1/SMO2 3 0.08% MVD 3 0.08% DXR 3 0.08% ADC 2 0.06% FLS 2 0.06% CPI1 2 0.06% MCT/IspD 2 0.06% MDS/IspF 2 0.06% CYP80F1 1 0.03% DWF5 1 0.03% HYD1 1 0.03% FK 1 0.03% DWF1 1 0.03% CMK/IspE 1 0.03% HDS/IspG 1 0.03% IDI 1 0.03% PMK 1 0.03% HDR/IspH 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 431 19 UGT (152) View species results
Alkaloid pathway 338 22 7DLGT (48) View species results
Phenylpropanoid pathway 323 12 POD (125) View species results
Flavonoid pathway 201 12 UFGT (131) View species results
Rosmarinic acid pathway 119 7 C4H (61) View species results
Steroid pathway 73 10 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 230 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Dole12G0006650.1 Alkaloid NMT medium borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
Dole12G0012290.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Dole12G0014450.1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Dole12G0016040.1 Alkaloid NMT medium borderline NMT__00038__sp_Q84PP7_MXMT2_COFAR
Dole13G0000150.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Dole13G0002590.1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Dole13G0008250.1 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Dole13G0014850.1 Alkaloid NMT low borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Dole13G0014890.1 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Dole13G0014990.1 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
Dole14G0000610.1 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Dole14G0002840.1 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Dole15G0001170.1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
Dole15G0001330.1 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Dole15G0001430.1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Dole15G0005090.1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Doleoriginal_scaffold_13880003120.1 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR