Diospyros oleifera (diospyros_oleifera)
Imported from atlas release summary for Diospyros oleifera.
1485
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1485
Candidate Genes
C4H
6.14%
C3'H/CYP98A
5.42%
BAHD
5.03%
UGT
4.45%
7DLGT
4.01%
UFGT
3.93%
POD
3.71%
IFS
3.54%
Other Families
63.76%
More Families (95)
CYP76
126
3.49%
T3O
115
3.18%
4CL
108
2.99%
F3H
104
2.88%
CODM/T6ODM
78
2.16%
F3'H/CYP75B
76
2.1%
STR
74
2.05%
BR6OX2/CYP85A2
72
1.99%
NMT
67
1.85%
CAD
66
1.83%
TPS
66
1.83%
DWF4/CYP90B1
65
1.8%
COMT
54
1.49%
GES
52
1.44%
16OMT
49
1.36%
TRI/TRII
48
1.33%
CAS
47
1.3%
CSE
46
1.27%
H6H
42
1.16%
LAC
39
1.08%
PYKS
38
1.05%
SMT1/SMT2/SMT3
38
1.05%
CYP71
36
1.0%
SGD
35
0.97%
IFR
34
0.94%
IO
33
0.91%
CYP90D1
32
0.89%
BBE
28
0.77%
DFR
27
0.75%
GS
26
0.72%
SLS
25
0.69%
ANR
25
0.69%
HCT
25
0.69%
NCS
23
0.64%
RAS
23
0.64%
T16H
21
0.58%
CCR
20
0.55%
G8O/G8H
18
0.5%
PMT
18
0.5%
8HGO
17
0.47%
ANS/LDOX
17
0.47%
F5H/CYP84A
17
0.47%
7DLH
16
0.44%
TAT
16
0.44%
BR6OX1/CYP85A1
16
0.44%
CYP51G1
16
0.44%
PAL
15
0.41%
F3'5'H/CYP75A
14
0.39%
CHS
14
0.39%
CPD/CYP90A1
14
0.39%
COR
13
0.36%
CPR
12
0.33%
AACT
12
0.33%
CCoAOMT
11
0.3%
MPO
10
0.28%
ROT3/CYP90C1
10
0.28%
FNS
9
0.25%
TYDC_DDC
8
0.22%
GGPPS
8
0.22%
FPPS
8
0.22%
CYP80B1
7
0.19%
CNMT
7
0.19%
HPPR
7
0.19%
MVK
6
0.17%
HMGR
6
0.17%
TDC
5
0.14%
CYP719
5
0.14%
SQS/FDFT1
5
0.14%
SQE
5
0.14%
DXS
5
0.14%
ISY
4
0.11%
LAMT
4
0.11%
XMT_MXMT_DXMT
4
0.11%
DET2
4
0.11%
HMGS
4
0.11%
6OMT_4OMT_SOMT
3
0.08%
CHI
3
0.08%
SMO1/SMO2
3
0.08%
MVD
3
0.08%
DXR
3
0.08%
ADC
2
0.06%
FLS
2
0.06%
CPI1
2
0.06%
MCT/IspD
2
0.06%
MDS/IspF
2
0.06%
CYP80F1
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
IDI
1
0.03%
PMK
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 431 | 19 | UGT (152) | View species results |
| Alkaloid pathway | 338 | 22 | 7DLGT (48) | View species results |
| Phenylpropanoid pathway | 323 | 12 | POD (125) | View species results |
| Flavonoid pathway | 201 | 12 | UFGT (131) | View species results |
| Rosmarinic acid pathway | 119 | 7 | C4H (61) | View species results |
| Steroid pathway | 73 | 10 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1281 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 230 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Dole01G0012530.1 | Alkaloid | PMT | medium | pass |
| Dole01G0022750.1 | Alkaloid | PMT | medium | borderline |
| Dole02G0003800.1 | Alkaloid | PMT | medium | borderline |
| Dole02G0021020.1 | Alkaloid | PMT | medium | borderline |
| Dole02G0021990.1 | Alkaloid | PMT | medium | pass |
| Dole03G0004720.1 | Alkaloid | PMT | low | borderline |
| Dole03G0004760.1 | Alkaloid | PMT | low | borderline |
| Dole03G0004770.1 | Alkaloid | PMT | low | borderline |
| Dole03G0004790.1 | Alkaloid | PMT | low | borderline |
| Dole03G0019550.1 | Alkaloid | PMT | medium | pass |
| Dole05G0019370.1 | Alkaloid | PMT | medium | pass |
| Dole07G0008920.1 | Alkaloid | PMT | low | borderline |
| Dole08G0004590.1 | Alkaloid | PMT | medium | pass |
| Dole08G0004620.1 | Alkaloid | PMT | medium | pass |
| Dole08G0007010.1 | Alkaloid | PMT | low | borderline |
| Dole09G0015100.1 | Alkaloid | PMT | medium | borderline |
| Dole10G0004820.1 | Alkaloid | PMT | low | borderline |
| Dole15G0003370.1 | Alkaloid | PMT | medium | pass |