Diphyscium fulvifolium (diphyscium_fulvifolium)
Imported from atlas release summary for Diphyscium fulvifolium.
511
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
511
Candidate Genes
BAHD
6.68%
4CL
6.3%
C4H
5.63%
C3'H/CYP98A
5.4%
POD
5.18%
NMT
4.35%
CYP76
4.35%
STR
2.85%
Other Families
59.26%
More Families (96)
IFS
38
2.85%
F3H
30
2.25%
IFR
30
2.25%
T3O
29
2.18%
DWF4/CYP90B1
27
2.03%
LAC
25
1.88%
GS
24
1.8%
H6H
24
1.8%
PYKS
24
1.8%
BR6OX2/CYP85A2
24
1.8%
F3'H/CYP75B
21
1.58%
SMT1/SMT2/SMT3
20
1.5%
UGT
18
1.35%
G8O/G8H
17
1.28%
CODM/T6ODM
17
1.28%
7DLGT
17
1.28%
CAD
17
1.28%
UFGT
16
1.2%
CYP71
16
1.2%
CHS
14
1.05%
PAL
14
1.05%
TRI/TRII
13
0.98%
SGD
13
0.98%
HCT
13
0.98%
T16H
12
0.9%
F3'5'H/CYP75A
12
0.9%
RAS
12
0.9%
8HGO
11
0.83%
IO
10
0.75%
COMT
10
0.75%
CAS
10
0.75%
CSE
9
0.68%
CNMT
8
0.6%
PMT
8
0.6%
ANS/LDOX
8
0.6%
CYP90D1
8
0.6%
ANR
7
0.53%
CPD/CYP90A1
7
0.53%
MPO
6
0.45%
SLS
6
0.45%
DFR
6
0.45%
CCR
6
0.45%
NCS
5
0.38%
LAMT
5
0.38%
COR
5
0.38%
FNS
5
0.38%
SQS/FDFT1
5
0.38%
7DLH
4
0.3%
CYP80F1
4
0.3%
16OMT
4
0.3%
BR6OX1/CYP85A1
4
0.3%
DET2
4
0.3%
FPPS
4
0.3%
AACT
4
0.3%
CYP80B1
3
0.23%
ISY
3
0.23%
CYP719
3
0.23%
TDC
3
0.23%
FLS
3
0.23%
CHI
3
0.23%
F5H/CYP84A
3
0.23%
TAT
3
0.23%
CPR
3
0.23%
DWF5
3
0.23%
ROT3/CYP90C1
3
0.23%
MVD
3
0.23%
DXS
3
0.23%
GGPPS
3
0.23%
BBE
2
0.15%
ADC
2
0.15%
CCoAOMT
2
0.15%
CYP51G1
2
0.15%
HYD1
2
0.15%
SMO1/SMO2
2
0.15%
DXR
2
0.15%
MVK
2
0.15%
PMK
2
0.15%
GPPS
2
0.15%
GES
1
0.08%
6OMT_4OMT_SOMT
1
0.08%
TYDC_DDC
1
0.08%
HPPR
1
0.08%
DWF7
1
0.08%
DWF1
1
0.08%
SQE
1
0.08%
CPI1
1
0.08%
FK
1
0.08%
TPS
1
0.08%
HMGS
1
0.08%
HDR/IspH
1
0.08%
MDS/IspF
1
0.08%
HDS/IspG
1
0.08%
MCT/IspD
1
0.08%
CMK/IspE
1
0.08%
IDI
1
0.08%
HMGR
1
0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 142 | 10 | POD (62) | View species results |
| Terpenoid pathway | 121 | 19 | BAHD (59) | View species results |
| Alkaloid pathway | 108 | 17 | NMT (19) | View species results |
| Rosmarinic acid pathway | 55 | 7 | C4H (23) | View species results |
| Flavonoid pathway | 52 | 9 | 4CL (14) | View species results |
| Steroid pathway | 33 | 11 | CAS (9) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 458 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 114 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| DIPfulscaffold_10012220 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_10027000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20032040 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20032050 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20032060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20036910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20038390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20038410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20049740 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20049750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20050430 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_20052200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_30056500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_30065140 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_30065850 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_40081160 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_40084840 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_40088650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50099190 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50102420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50104030 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_50112970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50121420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50121580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_50122700 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_50122710 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_60128360 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_60137780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_70154710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_70155300 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_70157940 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_80165930 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_80176870 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| DIPfulscaffold_80177910 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_80178590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_80184010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_80184020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| DIPfulscaffold_80185540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |