Elaeis guineensis (elaeis_guineensis)
Imported from atlas release summary for Elaeis guineensis.
1680
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1680
Candidate Genes
C3'H/CYP98A
6.16%
C4H
5.94%
BAHD
5.33%
UGT
4.62%
POD
4.32%
7DLGT
4.04%
UFGT
3.97%
IFS
3.97%
Other Families
61.66%
More Families (96)
4CL
153
3.86%
CYP76
134
3.38%
T3O
131
3.31%
F3H
115
2.9%
BR6OX2/CYP85A2
89
2.25%
DWF4/CYP90B1
85
2.15%
F3'H/CYP75B
73
1.84%
LAC
72
1.82%
NMT
65
1.64%
H6H
64
1.62%
CAD
63
1.59%
CODM/T6ODM
60
1.52%
CYP71
54
1.36%
SMT1/SMT2/SMT3
52
1.31%
STR
50
1.26%
IFR
48
1.21%
TRI/TRII
46
1.16%
PYKS
45
1.14%
TPS
43
1.09%
GES
41
1.04%
PAL
39
0.99%
PMT
38
0.96%
HCT
38
0.96%
CAS
37
0.93%
G8O/G8H
36
0.91%
COMT
36
0.91%
RAS
35
0.88%
GS
34
0.86%
T16H
33
0.83%
ANR
33
0.83%
CYP90D1
31
0.78%
16OMT
30
0.76%
CHS
25
0.63%
FNS
25
0.63%
SGD
24
0.61%
IO
24
0.61%
SLS
23
0.58%
CCR
22
0.56%
7DLH
18
0.45%
CPD/CYP90A1
18
0.45%
COR
16
0.4%
CSE
16
0.4%
8HGO
14
0.35%
NCS
14
0.35%
F3'5'H/CYP75A
14
0.35%
DFR
14
0.35%
CYP51G1
14
0.35%
BR6OX1/CYP85A1
13
0.33%
CCoAOMT
12
0.3%
BBE
11
0.28%
HPPR
11
0.28%
FPPS
11
0.28%
CYP719
10
0.25%
TYDC_DDC
10
0.25%
ROT3/CYP90C1
10
0.25%
LAMT
8
0.2%
F5H/CYP84A
8
0.2%
CPR
8
0.2%
AACT
8
0.2%
GGPPS
8
0.2%
CNMT
7
0.18%
DET2
7
0.18%
SMO1/SMO2
7
0.18%
CHI
6
0.15%
TAT
6
0.15%
HMGR
6
0.15%
DXS
6
0.15%
TDC
5
0.13%
CYP80B1
5
0.13%
ISY
5
0.13%
FLS
5
0.13%
SQE
5
0.13%
SQS/FDFT1
5
0.13%
MVK
5
0.13%
MPO
4
0.1%
6OMT_4OMT_SOMT
4
0.1%
ANS/LDOX
4
0.1%
CPI1
4
0.1%
MVD
3
0.08%
HMGS
3
0.08%
MDS/IspF
3
0.08%
ADC
2
0.05%
HYD1
2
0.05%
DWF7
2
0.05%
DWF5
2
0.05%
DWF1
2
0.05%
IDI
2
0.05%
CMK/IspE
2
0.05%
MCT/IspD
2
0.05%
DXR
2
0.05%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
GPPS
1
0.03%
PMK
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 462 | 20 | UGT (171) | View species results |
| Alkaloid pathway | 367 | 22 | 7DLGT (85) | View species results |
| Phenylpropanoid pathway | 361 | 11 | POD (155) | View species results |
| Flavonoid pathway | 254 | 11 | UFGT (146) | View species results |
| Rosmarinic acid pathway | 147 | 7 | C4H (69) | View species results |
| Steroid pathway | 89 | 12 | SMT1/SMT2/SMT3 (35) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1459 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 284 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| elaeis_guineensis_Egu007524-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu007525-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu009267-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu013990-mRNA-1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| elaeis_guineensis_Egu013991-mRNA-1 | Alkaloid | COR | low | borderline | COR__00005__sp_Q9SQ70_COR11_PAPSO |
| elaeis_guineensis_Egu014341-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu014805-mRNA-1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| elaeis_guineensis_Egu014806-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu016542-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu025063-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu025064-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu025065-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu027036-mRNA-1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| elaeis_guineensis_Egu027047-mRNA-1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| elaeis_guineensis_Egu028796-mRNA-1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| elaeis_guineensis_Egu028797-mRNA-1 | Alkaloid | COR | medium | pass | COR__00005__sp_Q9SQ70_COR11_PAPSO |