PlantSME Plant secondary metabolism enzyme database

Elaeis guineensis (elaeis_guineensis)

Imported from atlas release summary for Elaeis guineensis.

1680
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.5% Alkaloid pathway 21.85% Phenylpropanoid pathway 21.49% Flavonoid pathway 15.12% Rosmarinic acid pathway 8.75% Steroid pathway 5.3%
Family Distribution
C3'H/CYP98A 6.16% C4H 5.94% BAHD 5.33% UGT 4.62% POD 4.32% 7DLGT 4.04% UFGT 3.97% IFS 3.97%
Other Families 61.66%
More Families (96)
4CL 153 3.86% CYP76 134 3.38% T3O 131 3.31% F3H 115 2.9% BR6OX2/CYP85A2 89 2.25% DWF4/CYP90B1 85 2.15% F3'H/CYP75B 73 1.84% LAC 72 1.82% NMT 65 1.64% H6H 64 1.62% CAD 63 1.59% CODM/T6ODM 60 1.52% CYP71 54 1.36% SMT1/SMT2/SMT3 52 1.31% STR 50 1.26% IFR 48 1.21% TRI/TRII 46 1.16% PYKS 45 1.14% TPS 43 1.09% GES 41 1.04% PAL 39 0.99% PMT 38 0.96% HCT 38 0.96% CAS 37 0.93% G8O/G8H 36 0.91% COMT 36 0.91% RAS 35 0.88% GS 34 0.86% T16H 33 0.83% ANR 33 0.83% CYP90D1 31 0.78% 16OMT 30 0.76% CHS 25 0.63% FNS 25 0.63% SGD 24 0.61% IO 24 0.61% SLS 23 0.58% CCR 22 0.56% 7DLH 18 0.45% CPD/CYP90A1 18 0.45% COR 16 0.4% CSE 16 0.4% 8HGO 14 0.35% NCS 14 0.35% F3'5'H/CYP75A 14 0.35% DFR 14 0.35% CYP51G1 14 0.35% BR6OX1/CYP85A1 13 0.33% CCoAOMT 12 0.3% BBE 11 0.28% HPPR 11 0.28% FPPS 11 0.28% CYP719 10 0.25% TYDC_DDC 10 0.25% ROT3/CYP90C1 10 0.25% LAMT 8 0.2% F5H/CYP84A 8 0.2% CPR 8 0.2% AACT 8 0.2% GGPPS 8 0.2% CNMT 7 0.18% DET2 7 0.18% SMO1/SMO2 7 0.18% CHI 6 0.15% TAT 6 0.15% HMGR 6 0.15% DXS 6 0.15% TDC 5 0.13% CYP80B1 5 0.13% ISY 5 0.13% FLS 5 0.13% SQE 5 0.13% SQS/FDFT1 5 0.13% MVK 5 0.13% MPO 4 0.1% 6OMT_4OMT_SOMT 4 0.1% ANS/LDOX 4 0.1% CPI1 4 0.1% MVD 3 0.08% HMGS 3 0.08% MDS/IspF 3 0.08% ADC 2 0.05% HYD1 2 0.05% DWF7 2 0.05% DWF5 2 0.05% DWF1 2 0.05% IDI 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% DXR 2 0.05% XMT_MXMT_DXMT 1 0.03% ODC 1 0.03% GPPS 1 0.03% PMK 1 0.03% HDR/IspH 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 462 20 UGT (171) View species results
Alkaloid pathway 367 22 7DLGT (85) View species results
Phenylpropanoid pathway 361 11 POD (155) View species results
Flavonoid pathway 254 11 UFGT (146) View species results
Rosmarinic acid pathway 147 7 C4H (69) View species results
Steroid pathway 89 12 SMT1/SMT2/SMT3 (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1459 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 284 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status Best Target
elaeis_guineensis_Egu002171-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu004631-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu010505-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu011208-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu024854-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu024859-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu026529-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
elaeis_guineensis_Egu032170-mRNA-1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH