Eucommia ulmoides (eucommia_ulmoides)
Imported from atlas release summary for Eucommia ulmoides.
1632
Candidate Protein Records
1354
Pathway-Level Records
2950
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2950
Family-Level Calls
BAHD
6.64%
C4H
5.9%
UGT
5.83%
4CL
4.27%
C3'H/CYP98A
3.97%
POD
3.83%
IFS
3.8%
CYP76
3.32%
Other Families
62.44%
More Families (96)
7DLGT
94
3.19%
T3O
76
2.58%
F3H
75
2.54%
STR
73
2.47%
DWF4/CYP90B1
69
2.34%
NMT
64
2.17%
SGD
56
1.9%
H6H
55
1.86%
UFGT
55
1.86%
TPS
51
1.73%
CAD
47
1.59%
LAC
44
1.49%
CODM/T6ODM
43
1.46%
F3'H/CYP75B
43
1.46%
GES
40
1.36%
IFR
40
1.36%
GS
38
1.29%
CAS
37
1.25%
CYP71
35
1.19%
G8O/G8H
34
1.15%
SMT1/SMT2/SMT3
33
1.12%
HCT
31
1.05%
RAS
26
0.88%
TRI/TRII
25
0.85%
F5H/CYP84A
24
0.81%
TAT
24
0.81%
BR6OX2/CYP85A2
23
0.78%
IO
22
0.75%
PYKS
22
0.75%
T16H
22
0.75%
FNS
22
0.75%
COMT
22
0.75%
CSE
22
0.75%
NCS
21
0.71%
PMT
21
0.71%
ANS/LDOX
21
0.71%
PAL
21
0.71%
SLS
19
0.64%
CPD/CYP90A1
19
0.64%
16OMT
18
0.61%
CYP90D1
17
0.58%
7DLH
16
0.54%
BBE
15
0.51%
CCR
15
0.51%
CYP719
13
0.44%
COR
12
0.41%
MPO
12
0.41%
F3'5'H/CYP75A
12
0.41%
ANR
12
0.41%
DFR
11
0.37%
8HGO
10
0.34%
LAMT
10
0.34%
BR6OX1/CYP85A1
10
0.34%
FPPS
10
0.34%
ROT3/CYP90C1
9
0.31%
HPPR
8
0.27%
GGPPS
8
0.27%
CHI
6
0.2%
SQS/FDFT1
6
0.2%
CYP51G1
6
0.2%
AACT
6
0.2%
CNMT
5
0.17%
CYP80B1
5
0.17%
HMGR
5
0.17%
DXS
5
0.17%
TYDC_DDC
4
0.14%
ISY
4
0.14%
CHS
4
0.14%
CCoAOMT
4
0.14%
CPR
4
0.14%
MVK
4
0.14%
HMGS
4
0.14%
FLS
3
0.1%
SQE
3
0.1%
SMO1/SMO2
3
0.1%
DWF5
3
0.1%
MVD
3
0.1%
XMT_MXMT_DXMT
2
0.07%
ADC
2
0.07%
ODC
2
0.07%
TDC
2
0.07%
CPI1
2
0.07%
DWF1
2
0.07%
DXR
2
0.07%
MCT/IspD
2
0.07%
HDR/IspH
2
0.07%
FK
1
0.03%
HYD1
1
0.03%
DET2
1
0.03%
DWF7
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
IDI
1
0.03%
MDS/IspF
1
0.03%
GPPS
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 468 | 20 | UGT (159) | View species results |
| Alkaloid pathway | 319 | 24 | SGD (52) | View species results |
| Phenylpropanoid pathway | 276 | 13 | POD (100) | View species results |
| Flavonoid pathway | 116 | 12 | UFGT (40) | View species results |
| Rosmarinic acid pathway | 108 | 7 | 4CL (31) | View species results |
| Steroid pathway | 67 | 11 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 975 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 253 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| EulmGWHAAAL000210900232320.1 | Alkaloid | PMT | low | borderline |
| EulmGWHAAAL000231670241330.1 | Alkaloid | PMT | low | borderline |
| EulmGWHAAAL000248980247750.1 | Alkaloid | PMT | low | borderline |
| EulmGWHAAAL000267690254620.1 | Alkaloid | PMT | medium | borderline |
| EulmGWHAAAL000281560262350.1 | Alkaloid | PMT | medium | borderline |
| EulmGWHAAAL000282290262820.1 | Alkaloid | PMT | low | borderline |
| EulmGWHAAAL000000110014900.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000000220030330.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000000420046100.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000000690065280.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000000810073780.1 | Alkaloid | PYKS | high | pass |
| EulmGWHAAAL000001490112180.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000002220131900.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000002260132640.1 | Alkaloid | PYKS | high | pass |
| EulmGWHAAAL000006990143260.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000017040147590.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000018670148230.1 | Alkaloid | PYKS | high | pass |
| EulmGWHAAAL000125660195860.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000130150196980.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000144740202800.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000148560204120.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000229290240410.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000235580243070.1 | Alkaloid | PYKS | high | pass |
| EulmGWHAAAL000244180246200.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000244180246210.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000244180246220.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000279130261270.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000287030264080.1 | Alkaloid | PYKS | low | borderline |
| EulmGWHAAAL000000050007210.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000180025930.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000230030590.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000230031080.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000300036750.1 | Alkaloid | SGD | low | borderline |
| EulmGWHAAAL000000320038840.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000320038850.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000320038860.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000410045700.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000520053070.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000600058770.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000000600058780.1 | Alkaloid | SGD | low | borderline |
| EulmGWHAAAL000000750070170.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001000086110.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001150095480.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001270102380.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001300103270.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001320105160.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001420108920.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001420108930.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000001530114220.1 | Alkaloid | SGD | medium | pass |
| EulmGWHAAAL000002220132220.1 | Alkaloid | SGD | medium | pass |