Eutrema salsugineum (eutrema_salsugineum)
Imported from atlas release summary for Eutrema salsugineum.
1374
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1374
Candidate Genes
BAHD
6.94%
C4H
6.14%
C3'H/CYP98A
5.78%
4CL
5.41%
POD
4.4%
IFS
3.45%
CYP76
3.45%
T3O
3.21%
Other Families
61.22%
More Families (95)
NMT
101
3.09%
UGT
97
2.96%
7DLGT
93
2.84%
UFGT
93
2.84%
DWF4/CYP90B1
88
2.69%
F3H
85
2.6%
SMT1/SMT2/SMT3
67
2.05%
F3'H/CYP75B
65
1.99%
SGD
64
1.96%
STR
57
1.74%
BR6OX2/CYP85A2
51
1.56%
CYP71
51
1.56%
CODM/T6ODM
46
1.41%
TRI/TRII
44
1.34%
H6H
40
1.22%
IFR
37
1.13%
CSE
35
1.07%
CAD
33
1.01%
BBE
32
0.98%
PYKS
30
0.92%
CAS
30
0.92%
LAC
29
0.89%
SLS
26
0.79%
T16H
26
0.79%
LAMT
26
0.79%
TAT
26
0.79%
COMT
25
0.76%
F5H/CYP84A
24
0.73%
IO
23
0.7%
ANR
23
0.7%
CCR
23
0.7%
HCT
23
0.7%
RAS
23
0.7%
GS
19
0.58%
G8O/G8H
19
0.58%
FNS
19
0.58%
CPD/CYP90A1
19
0.58%
TPS
19
0.58%
16OMT
18
0.55%
PAL
18
0.55%
GES
17
0.52%
8HGO
17
0.52%
CYP90D1
16
0.49%
BR6OX1/CYP85A1
15
0.46%
F3'5'H/CYP75A
14
0.43%
COR
13
0.4%
ROT3/CYP90C1
13
0.4%
GGPPS
13
0.4%
NCS
12
0.37%
7DLH
11
0.34%
PMT
11
0.34%
FPPS
10
0.31%
MVD
9
0.28%
CNMT
8
0.24%
ANS/LDOX
8
0.24%
CPR
8
0.24%
CYP51G1
8
0.24%
AACT
8
0.24%
DFR
7
0.21%
DET2
7
0.21%
SQS/FDFT1
7
0.21%
MPO
6
0.18%
CYP719
6
0.18%
CHS
6
0.18%
CHI
6
0.18%
CCoAOMT
6
0.18%
SMO1/SMO2
6
0.18%
CYP80B1
5
0.15%
SQE
5
0.15%
XMT_MXMT_DXMT
4
0.12%
CYP80F1
4
0.12%
DWF7
4
0.12%
DWF1
4
0.12%
DXS
4
0.12%
MVK
4
0.12%
ADC
3
0.09%
HPPR
3
0.09%
HMGR
3
0.09%
IDI
3
0.09%
MCT/IspD
3
0.09%
ISY
2
0.06%
TYDC_DDC
2
0.06%
PMK
2
0.06%
DXR
2
0.06%
ODC
1
0.03%
TDC
1
0.03%
FLS
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
DWF5
1
0.03%
HDR/IspH
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 410 | 18 | BAHD (190) | View species results |
| Alkaloid pathway | 318 | 20 | NMT (62) | View species results |
| Phenylpropanoid pathway | 293 | 11 | POD (139) | View species results |
| Flavonoid pathway | 152 | 10 | UFGT (88) | View species results |
| Rosmarinic acid pathway | 103 | 7 | C4H (35) | View species results |
| Steroid pathway | 98 | 12 | SMT1/SMT2/SMT3 (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1205 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 273 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Esalscaffold_100031120.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Esalscaffold_100035550.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Esalscaffold_100038990.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_10003910.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Esalscaffold_100040540.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Esalscaffold_10008900.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Esalscaffold_10009130.1 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Esalscaffold_10009130.2 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Esalscaffold_10010700.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Esalscaffold_10012290.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Esalscaffold_10023970.1 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Esalscaffold_10026110.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Esalscaffold_10029330.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Esalscaffold_110048910.1 | Alkaloid | NMT | low | borderline | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Esalscaffold_110048990.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Esalscaffold_110048990.2 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Esalscaffold_120056250.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Esalscaffold_130057780.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Esalscaffold_130057800.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Esalscaffold_130057830.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Esalscaffold_130059690.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Esalscaffold_130061500.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Esalscaffold_130063710.1 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| Esalscaffold_130067070.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Esalscaffold_130069570.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Esalscaffold_130074350.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Esalscaffold_130077010.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Esalscaffold_130077720.1 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Esalscaffold_130079780.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Esalscaffold_150089140.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_150089990.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Esalscaffold_150089990.2 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Esalscaffold_150090330.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Esalscaffold_150091230.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Esalscaffold_150091260.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Esalscaffold_160096790.1 | Alkaloid | NMT | medium | borderline | NMT__00062__sp_Q9SCP7_NAMT1_ARATH |
| Esalscaffold_170104520.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Esalscaffold_170106630.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Esalscaffold_190108790.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Esalscaffold_190110400.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Esalscaffold_200147150.1 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| Esalscaffold_200150400.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_200150410.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_200150420.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_200150430.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Esalscaffold_20117570.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Esalscaffold_20117580.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Esalscaffold_20122060.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Esalscaffold_20125640.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Esalscaffold_20125640.2 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |