Eutrema salsugineum (eutrema_salsugineum)
Imported from atlas release summary for Eutrema salsugineum.
1681
Candidate Protein Records
1374
Pathway-Level Records
3272
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3272
Family-Level Calls
BAHD
6.94%
C4H
6.14%
C3'H/CYP98A
5.78%
4CL
5.41%
POD
4.4%
IFS
3.45%
CYP76
3.45%
T3O
3.21%
Other Families
61.22%
More Families (95)
NMT
101
3.09%
UGT
97
2.96%
7DLGT
93
2.84%
UFGT
93
2.84%
DWF4/CYP90B1
88
2.69%
F3H
85
2.6%
SMT1/SMT2/SMT3
67
2.05%
F3'H/CYP75B
65
1.99%
SGD
64
1.96%
STR
57
1.74%
BR6OX2/CYP85A2
51
1.56%
CYP71
51
1.56%
CODM/T6ODM
46
1.41%
TRI/TRII
44
1.34%
H6H
40
1.22%
IFR
37
1.13%
CSE
35
1.07%
CAD
33
1.01%
BBE
32
0.98%
PYKS
30
0.92%
CAS
30
0.92%
LAC
29
0.89%
SLS
26
0.79%
T16H
26
0.79%
LAMT
26
0.79%
TAT
26
0.79%
COMT
25
0.76%
F5H/CYP84A
24
0.73%
IO
23
0.7%
ANR
23
0.7%
CCR
23
0.7%
HCT
23
0.7%
RAS
23
0.7%
GS
19
0.58%
G8O/G8H
19
0.58%
FNS
19
0.58%
CPD/CYP90A1
19
0.58%
TPS
19
0.58%
16OMT
18
0.55%
PAL
18
0.55%
GES
17
0.52%
8HGO
17
0.52%
CYP90D1
16
0.49%
BR6OX1/CYP85A1
15
0.46%
F3'5'H/CYP75A
14
0.43%
COR
13
0.4%
ROT3/CYP90C1
13
0.4%
GGPPS
13
0.4%
NCS
12
0.37%
7DLH
11
0.34%
PMT
11
0.34%
FPPS
10
0.31%
MVD
9
0.28%
CNMT
8
0.24%
ANS/LDOX
8
0.24%
CPR
8
0.24%
CYP51G1
8
0.24%
AACT
8
0.24%
DFR
7
0.21%
DET2
7
0.21%
SQS/FDFT1
7
0.21%
MPO
6
0.18%
CYP719
6
0.18%
CHS
6
0.18%
CHI
6
0.18%
CCoAOMT
6
0.18%
SMO1/SMO2
6
0.18%
CYP80B1
5
0.15%
SQE
5
0.15%
XMT_MXMT_DXMT
4
0.12%
CYP80F1
4
0.12%
DWF7
4
0.12%
DWF1
4
0.12%
DXS
4
0.12%
MVK
4
0.12%
ADC
3
0.09%
HPPR
3
0.09%
HMGR
3
0.09%
IDI
3
0.09%
MCT/IspD
3
0.09%
ISY
2
0.06%
TYDC_DDC
2
0.06%
PMK
2
0.06%
DXR
2
0.06%
ODC
1
0.03%
TDC
1
0.03%
FLS
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
DWF5
1
0.03%
HDR/IspH
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 410 | 18 | BAHD (190) | View species results |
| Alkaloid pathway | 318 | 20 | NMT (62) | View species results |
| Phenylpropanoid pathway | 293 | 11 | POD (139) | View species results |
| Flavonoid pathway | 152 | 10 | UFGT (88) | View species results |
| Rosmarinic acid pathway | 103 | 7 | C4H (35) | View species results |
| Steroid pathway | 98 | 12 | SMT1/SMT2/SMT3 (47) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1205 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 273 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Esalscaffold_30157600.2 | Alkaloid | PYKS | high | pass |
| Esalscaffold_30157600.3 | Alkaloid | PYKS | high | pass |
| Esalscaffold_50183450.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_50189100.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_50200190.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_50203660.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_50205670.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_50206550.1 | Alkaloid | PYKS | high | pass |
| Esalscaffold_60216650.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_60218540.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_80240350.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_90256380.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_90259340.1 | Alkaloid | PYKS | low | borderline |
| Esalscaffold_100036730.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_10018300.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_10018650.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_10018650.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_10018650.3 | Alkaloid | SGD | medium | pass |
| Esalscaffold_110052420.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130060100.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130063600.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130063630.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130067190.1 | Alkaloid | SGD | low | borderline |
| Esalscaffold_130067190.2 | Alkaloid | SGD | low | borderline |
| Esalscaffold_130072600.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130072600.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130072610.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130072620.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130074770.1 | Alkaloid | SGD | low | borderline |
| Esalscaffold_130077840.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_130077840.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_140087100.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_150090970.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_160101340.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190107880.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190107890.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190107890.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190110260.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190110270.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190110270.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_190110280.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_200148920.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153000.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153010.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153010.2 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153020.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153030.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153040.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153050.1 | Alkaloid | SGD | medium | pass |
| Esalscaffold_220153060.1 | Alkaloid | SGD | medium | pass |