PlantSME Plant secondary metabolism enzyme database

Faidherbia albida (faidherbia_albida)

Imported from atlas release summary for Faidherbia albida.

1493
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.41% Alkaloid pathway 21.23% Phenylpropanoid pathway 21.1% Flavonoid pathway 13.26% Rosmarinic acid pathway 8.04% Steroid pathway 5.96%
Family Distribution
C4H 5.61% C3'H/CYP98A 5.45% BAHD 5.4% UGT 4.35% CYP76 3.7% 7DLGT 3.65% IFS 3.39% UFGT 3.39%
Other Families 65.06%
More Families (96)
4CL 132 3.39% POD 129 3.32% F3H 125 3.21% T3O 114 2.93% CODM/T6ODM 92 2.37% DWF4/CYP90B1 87 2.24% NMT 83 2.13% F3'H/CYP75B 78 2.01% CAD 73 1.88% BR6OX2/CYP85A2 66 1.7% H6H 58 1.49% STR 57 1.47% COMT 54 1.39% TRI/TRII 53 1.36% CAS 53 1.36% TPS 51 1.31% CYP71 49 1.26% G8O/G8H 47 1.21% SMT1/SMT2/SMT3 46 1.18% GES 44 1.13% HCT 42 1.08% T16H 41 1.05% CSE 39 1.0% PYKS 38 0.98% RAS 38 0.98% FNS 37 0.95% IFR 36 0.93% CYP90D1 35 0.9% BBE 34 0.87% GS 34 0.87% 16OMT 32 0.82% LAC 32 0.82% F5H/CYP84A 31 0.8% IO 26 0.67% PMT 26 0.67% ANR 25 0.64% COR 24 0.62% SLS 23 0.59% NCS 21 0.54% SGD 20 0.51% F3'5'H/CYP75A 20 0.51% CCR 19 0.49% PAL 18 0.46% 7DLH 17 0.44% DFR 16 0.41% BR6OX1/CYP85A1 16 0.41% ANS/LDOX 15 0.39% TAT 15 0.39% CYP51G1 14 0.36% CPD/CYP90A1 14 0.36% LAMT 13 0.33% 8HGO 12 0.31% TDC 12 0.31% DXS 12 0.31% CHS 11 0.28% ISY 10 0.26% FLS 10 0.26% ROT3/CYP90C1 10 0.26% FPPS 10 0.26% CNMT 9 0.23% 6OMT_4OMT_SOMT 8 0.21% CPR 8 0.21% CYP80B1 7 0.18% CCoAOMT 7 0.18% AACT 7 0.18% MPO 6 0.15% HPPR 6 0.15% SQS/FDFT1 6 0.15% GGPPS 6 0.15% TYDC_DDC 5 0.13% CYP719 4 0.1% CHI 4 0.1% SQE 4 0.1% DWF7 4 0.1% SMO1/SMO2 4 0.1% MVD 4 0.1% PMK 4 0.1% CPI1 3 0.08% DWF1 3 0.08% DET2 3 0.08% IDI 3 0.08% HDR/IspH 3 0.08% MCT/IspD 3 0.08% XMT_MXMT_DXMT 2 0.05% ADC 2 0.05% HMGS 2 0.05% DXR 2 0.05% HDS/IspG 2 0.05% CMK/IspE 2 0.05% MVK 2 0.05% CYP80F1 1 0.03% HYD1 1 0.03% FK 1 0.03% DWF5 1 0.03% MDS/IspF 1 0.03% HMGR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 454 19 BAHD (164) View species results
Alkaloid pathway 317 23 7DLGT (58) View species results
Phenylpropanoid pathway 315 11 POD (121) View species results
Flavonoid pathway 198 13 UFGT (121) View species results
Rosmarinic acid pathway 120 7 C4H (45) View species results
Steroid pathway 89 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1406 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 290 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status Best Target
Falbscaffold102_cov1860006990 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold1139_cov1840016450 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold121_cov1960026950 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
Falbscaffold14331_cov1890045350 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold16_cov2290069790 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold16_cov2290069850 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold21_cov1830106060 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold2280_cov2090110250 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold2280_cov2090110270 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold2575_cov2270124470 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold298_cov1790139090 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold3112_cov2310144210 Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold731_cov1860222850 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Falbscaffold80894_cov1940244150 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
Falbscaffold944_cov1900283520 Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO