PlantSME Plant secondary metabolism enzyme database

Fontinalis (fontinalis)

Imported from atlas release summary for Fontinalis.

475
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.95% Terpenoid pathway 24.63% Alkaloid pathway 18.74% Flavonoid pathway 11.37% Rosmarinic acid pathway 10.74% Steroid pathway 7.58%
Family Distribution
BAHD 6.9% 4CL 6.56% POD 6.48% C4H 5.55% C3'H/CYP98A 4.63% NMT 4.04% CYP76 3.62% IFR 3.11%
Other Families 59.13%
More Families (92)
PAL 33 2.78% STR 32 2.69% GS 28 2.35% F3H 28 2.35% IFS 27 2.27% T3O 26 2.19% BR6OX2/CYP85A2 24 2.02% F3'H/CYP75B 22 1.85% DWF4/CYP90B1 22 1.85% PYKS 19 1.6% SMT1/SMT2/SMT3 19 1.6% CODM/T6ODM 16 1.35% UFGT 16 1.35% 7DLGT 15 1.26% CAD 15 1.26% UGT 15 1.26% IO 14 1.18% H6H 14 1.18% CYP71 14 1.18% TRI/TRII 12 1.01% CYP90D1 12 1.01% CSE 11 0.93% CAS 11 0.93% CHS 10 0.84% TDC 8 0.67% SLS 8 0.67% F3'5'H/CYP75A 8 0.67% SGD 7 0.59% PMT 7 0.59% CNMT 7 0.59% 8HGO 7 0.59% NCS 7 0.59% LAC 7 0.59% SQS/FDFT1 7 0.59% LAMT 6 0.5% COR 6 0.5% CYP80B1 6 0.5% CCR 6 0.5% COMT 6 0.5% GGPPS 6 0.5% AACT 6 0.5% TYDC_DDC 5 0.42% 7DLH 5 0.42% BBE 5 0.42% T16H 5 0.42% ANR 5 0.42% HCT 5 0.42% CPR 5 0.42% RAS 5 0.42% TAT 5 0.42% MVK 5 0.42% G8O/G8H 4 0.34% 16OMT 4 0.34% FNS 4 0.34% DET2 4 0.34% DWF5 4 0.34% CPD/CYP90A1 4 0.34% FPPS 4 0.34% ADC 3 0.25% MPO 3 0.25% DFR 3 0.25% CHI 3 0.25% ROT3/CYP90C1 3 0.25% MVD 3 0.25% HDR/IspH 3 0.25% F5H/CYP84A 2 0.17% CCoAOMT 2 0.17% SQE 2 0.17% DWF7 2 0.17% SMO1/SMO2 2 0.17% HMGR 2 0.17% HDS/IspG 2 0.17% XMT_MXMT_DXMT 1 0.08% 6OMT_4OMT_SOMT 1 0.08% GES 1 0.08% ISY 1 0.08% FLS 1 0.08% ANS/LDOX 1 0.08% HPPR 1 0.08% HYD1 1 0.08% CPI1 1 0.08% DWF1 1 0.08% FK 1 0.08% CYP51G1 1 0.08% HMGS 1 0.08% MCT/IspD 1 0.08% CMK/IspE 1 0.08% DXS 1 0.08% DXR 1 0.08% IDI 1 0.08% MDS/IspF 1 0.08% TPS 1 0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 128 10 POD (72) View species results
Terpenoid pathway 117 19 BAHD (53) View species results
Alkaloid pathway 89 16 NMT (24) View species results
Flavonoid pathway 54 7 4CL (13) View species results
Rosmarinic acid pathway 51 7 C4H (15) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 21 371 7DLH, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 92 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP71
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Gene Pathway Family Confidence Status Best Target
Fontinalis2637860022930 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2690130029920 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2742590051220 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2770190075290 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2780050089020 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2790200106490 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2794880118120 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2797610124490 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2805680143010 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2812230159820 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2816840173370 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2824650196670 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2827070205170 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
Fontinalis2829890214800 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH