PlantSME Plant secondary metabolism enzyme database

Fragaria chiloensis (fragaria_chiloensis)

Imported from atlas release summary for Fragaria chiloensis.

4280
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1297 20 BAHD (475) View species results
Alkaloid pathway 966 27 7DLGT (141) View species results
Phenylpropanoid pathway 887 13 POD (324) View species results
Flavonoid pathway 464 14 UFGT (273) View species results
Rosmarinic acid pathway 358 7 C4H (167) View species results
Steroid pathway 308 13 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4247 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 756 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
fragaria_chiloensis_maker-4B-augustus-gene-77.157-mRNA-1 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
fragaria_chiloensis_maker-4B-exonerate_protein2genome-gene-147.40-mRNA-1 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_chiloensis_maker-4C-augustus-gene-119.12-mRNA-1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
fragaria_chiloensis_maker-4C-augustus-gene-163.57-mRNA-1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
fragaria_chiloensis_maker-4C-augustus-gene-23.28-mRNA-1 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
fragaria_chiloensis_maker-4C-augustus-gene-240.56-mRNA-1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
fragaria_chiloensis_maker-4C-augustus-gene-241.125-mRNA-1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
fragaria_chiloensis_maker-4C-augustus-gene-37.162-mRNA-1 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
fragaria_chiloensis_maker-4C-augustus-gene-88.42-mRNA-1 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_chiloensis_maker-4D-augustus-gene-121.14-mRNA-1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
fragaria_chiloensis_maker-4D-augustus-gene-200.126-mRNA-1 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_chiloensis_maker-4D-augustus-gene-262.21-mRNA-1 Alkaloid NMT medium borderline NMT__00038__sp_Q84PP7_MXMT2_COFAR
fragaria_chiloensis_maker-4D-augustus-gene-264.14-mRNA-1 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
fragaria_chiloensis_maker-4D-augustus-gene-35.117-mRNA-1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
fragaria_chiloensis_maker-4D-augustus-gene-36.68-mRNA-1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
fragaria_chiloensis_maker-5A-augustus-gene-13.23-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-137.28-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-159.10-mRNA-1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-191.129-mRNA-1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-252.106-mRNA-1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-47.116-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-89.128-mRNA-1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
fragaria_chiloensis_maker-5A-augustus-gene-98.66-mRNA-1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-116.1-mRNA-1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-128.7-mRNA-1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-137.93-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-172.67-mRNA-1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-181.10-mRNA-1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-192.132-mRNA-1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-237.1-mRNA-1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-238.2-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-274.112-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_chiloensis_maker-5B-augustus-gene-9.10-mRNA-1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
fragaria_chiloensis_maker-5B-exonerate_protein2genome-gene-172.18-mRNA-1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-102.6-mRNA-1 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-114.80-mRNA-1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-157.8-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-179.18-mRNA-1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-272.89-mRNA-1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
fragaria_chiloensis_maker-5C-augustus-gene-54.111-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-12.9-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-156.68-mRNA-1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-251.3-mRNA-1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-43.138-mRNA-1 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-86.6-mRNA-1 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
fragaria_chiloensis_maker-5D-augustus-gene-96.0-mRNA-1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
fragaria_chiloensis_maker-5D-exonerate_protein2genome-gene-190.75-mRNA-1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_chiloensis_maker-6A-augustus-gene-157.63-mRNA-1 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
fragaria_chiloensis_maker-6A-augustus-gene-241.74-mRNA-1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_chiloensis_maker-6A-augustus-gene-242.1-mRNA-1 Alkaloid NMT medium borderline NMT__00062__sp_Q9SCP7_NAMT1_ARATH