PlantSME Plant secondary metabolism enzyme database

Fragaria chiloensis (fragaria_chiloensis)

Imported from atlas release summary for Fragaria chiloensis.

4280
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1297 20 BAHD (475) View species results
Alkaloid pathway 966 27 7DLGT (141) View species results
Phenylpropanoid pathway 887 13 POD (324) View species results
Flavonoid pathway 464 14 UFGT (273) View species results
Rosmarinic acid pathway 358 7 C4H (167) View species results
Steroid pathway 308 13 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4247 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 756 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
fragaria_chiloensis_augustus_masked-1A-processed-gene-8.128-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-2C-processed-gene-100.154-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-2D-processed-gene-22.43-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-3A-processed-gene-149.3-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-3A-processed-gene-165.142-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-4A-processed-gene-8.149-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-4B-processed-gene-7.129-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-4C-processed-gene-7.105-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5A-processed-gene-79.16-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5A-processed-gene-79.17-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-5A-processed-gene-79.18-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5B-processed-gene-203.18-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-5B-processed-gene-203.19-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5B-processed-gene-31.8-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5B-processed-gene-31.9-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5C-processed-gene-252.14-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5C-processed-gene-45.1-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
fragaria_chiloensis_augustus_masked-5C-processed-gene-89.118-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5C-processed-gene-89.119-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-5D-processed-gene-35.161-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
fragaria_chiloensis_augustus_masked-5D-processed-gene-76.139-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-6A-processed-gene-213.92-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
fragaria_chiloensis_augustus_masked-6A-processed-gene-227.16-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-6A-processed-gene-326.16-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-6B-processed-gene-250.70-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-6B-processed-gene-305.85-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
fragaria_chiloensis_augustus_masked-6C-processed-gene-71.13-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
fragaria_chiloensis_augustus_masked-6D-processed-gene-118.45-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_augustus_masked-6D-processed-gene-26.41-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_augustus_masked-6D-processed-gene-70.1-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
fragaria_chiloensis_maker-1A-augustus-gene-129.91-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_maker-1A-augustus-gene-170.45-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-1B-augustus-gene-143.26-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_maker-1B-augustus-gene-201.16-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-1C-augustus-gene-127.68-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_maker-1D-augustus-gene-132.7-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_maker-1D-augustus-gene-72.3-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-2A-augustus-gene-249.71-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
fragaria_chiloensis_maker-2A-augustus-gene-94.116-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-2B-augustus-gene-192.162-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-2B-augustus-gene-47.1-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
fragaria_chiloensis_maker-2D-augustus-gene-153.6-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
fragaria_chiloensis_maker-3A-augustus-gene-232.150-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
fragaria_chiloensis_maker-3A-augustus-gene-244.19-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
fragaria_chiloensis_maker-3A-augustus-gene-312.121-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
fragaria_chiloensis_maker-3A-augustus-gene-313.18-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
fragaria_chiloensis_maker-3A-augustus-gene-58.16-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
fragaria_chiloensis_maker-3A-augustus-gene-58.17-mRNA-1 Alkaloid TRI/TRII low borderline TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
fragaria_chiloensis_maker-3B-augustus-gene-157.2-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
fragaria_chiloensis_maker-3B-augustus-gene-257.122-mRNA-1 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH