PlantSME Plant secondary metabolism enzyme database

Fragaria chiloensis (fragaria_chiloensis)

Imported from atlas release summary for Fragaria chiloensis.

4280
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1297 20 BAHD (475) View species results
Alkaloid pathway 966 27 7DLGT (141) View species results
Phenylpropanoid pathway 887 13 POD (324) View species results
Flavonoid pathway 464 14 UFGT (273) View species results
Rosmarinic acid pathway 358 7 C4H (167) View species results
Steroid pathway 308 13 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4247 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 756 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
fragaria_chiloensis_maker-2C-augustus-gene-110.72-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-2D-augustus-gene-30.87-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-2D-augustus-gene-30.88-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-2D-augustus-gene-30.89-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-2D-augustus-gene-35.4-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-3A-augustus-gene-178.79-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3A-augustus-gene-183.0-mRNA-1 Terpenoid TPS medium pass TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA
fragaria_chiloensis_maker-3A-augustus-gene-185.10-mRNA-1 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
fragaria_chiloensis_maker-3A-augustus-gene-185.9-mRNA-1 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
fragaria_chiloensis_maker-3A-augustus-gene-234.2-mRNA-1 Terpenoid TPS medium pass TPS__00004__sp_A0A0M5L832_TPS14_TRIWF
fragaria_chiloensis_maker-3A-augustus-gene-234.7-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3A-augustus-gene-234.9-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3A-augustus-gene-303.13-mRNA-1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
fragaria_chiloensis_maker-3A-augustus-gene-303.8-mRNA-1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fragaria_chiloensis_maker-3A-augustus-gene-303.9-mRNA-1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fragaria_chiloensis_maker-3A-exonerate_protein2genome-gene-221.38-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3A-exonerate_protein2genome-gene-94.32-mRNA-1 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
fragaria_chiloensis_maker-3B-augustus-gene-121.74-mRNA-1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
fragaria_chiloensis_maker-3B-augustus-gene-13.92-mRNA-1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
fragaria_chiloensis_maker-3B-augustus-gene-14.24-mRNA-1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fragaria_chiloensis_maker-3B-augustus-gene-14.25-mRNA-1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fragaria_chiloensis_maker-3B-augustus-gene-220.43-mRNA-1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
fragaria_chiloensis_maker-3C-augustus-gene-137.10-mRNA-1 Terpenoid TPS medium pass TPS__00129__sp_J7LP58_TPS1_PHYDL
fragaria_chiloensis_maker-3C-augustus-gene-137.9-mRNA-1 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
fragaria_chiloensis_maker-3C-augustus-gene-138.39-mRNA-1 Terpenoid TPS medium pass TPS__00078__sp_D5KXD2_TPS12_SOLLC
fragaria_chiloensis_maker-3C-augustus-gene-139.0-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3C-augustus-gene-139.1-mRNA-1 Terpenoid TPS medium pass TPS__00119__sp_G8H5N3_TPS16_SOLLC
fragaria_chiloensis_maker-3C-augustus-gene-141.4-mRNA-1 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
fragaria_chiloensis_maker-3C-augustus-gene-146.97-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3C-augustus-gene-146.98-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3C-augustus-gene-17.30-mRNA-1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fragaria_chiloensis_maker-3C-augustus-gene-243.57-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3C-augustus-gene-82.10-mRNA-1 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
fragaria_chiloensis_maker-3C-augustus-gene-82.7-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3C-augustus-gene-83.7-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3C-exonerate_protein2genome-gene-141.41-mRNA-1 Terpenoid TPS medium pass TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA
fragaria_chiloensis_maker-3C-exonerate_protein2genome-gene-82.59-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3D-augustus-gene-164.5-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3D-augustus-gene-171.104-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-3D-augustus-gene-173.92-mRNA-1 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
fragaria_chiloensis_maker-3D-augustus-gene-173.93-mRNA-1 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
fragaria_chiloensis_maker-3D-augustus-gene-223.111-mRNA-1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
fragaria_chiloensis_maker-3D-augustus-gene-240.4-mRNA-1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fragaria_chiloensis_maker-3D-augustus-gene-286.121-mRNA-1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
fragaria_chiloensis_maker-3D-augustus-gene-75.60-mRNA-1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
fragaria_chiloensis_maker-4A-augustus-gene-55.17-mRNA-1 Terpenoid TPS low borderline TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
fragaria_chiloensis_maker-4A-augustus-gene-55.19-mRNA-1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
fragaria_chiloensis_maker-4B-augustus-gene-45.123-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-4B-augustus-gene-45.124-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
fragaria_chiloensis_maker-4D-augustus-gene-232.114-mRNA-1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO