Fragaria chiloensis (fragaria_chiloensis)
Imported from atlas release summary for Fragaria chiloensis.
5280
Candidate Protein Records
4280
Pathway-Level Records
10728
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
10728
Family-Level Calls
C4H
6.43%
C3'H/CYP98A
6.07%
BAHD
5.66%
IFS
4.28%
UGT
4.06%
CYP76
3.91%
4CL
3.58%
T3O
3.49%
Other Families
62.52%
More Families (97)
POD
372
3.47%
7DLGT
351
3.27%
UFGT
316
2.95%
F3H
268
2.5%
DWF4/CYP90B1
257
2.4%
NMT
252
2.35%
BR6OX2/CYP85A2
219
2.04%
F3'H/CYP75B
217
2.02%
STR
209
1.95%
LAC
190
1.77%
CAD
186
1.73%
H6H
167
1.56%
CODM/T6ODM
155
1.44%
SMT1/SMT2/SMT3
149
1.39%
CAS
144
1.34%
TPS
140
1.3%
GES
128
1.19%
CYP90D1
117
1.09%
TRI/TRII
116
1.08%
CYP71
108
1.01%
GS
104
0.97%
SLS
104
0.97%
T16H
92
0.86%
IFR
90
0.84%
G8O/G8H
85
0.79%
SGD
84
0.78%
PYKS
79
0.74%
HCT
77
0.72%
NCS
76
0.71%
IO
76
0.71%
ANR
76
0.71%
PMT
73
0.68%
COMT
72
0.67%
RAS
72
0.67%
CSE
70
0.65%
CCR
70
0.65%
F3'5'H/CYP75A
67
0.62%
SQE
61
0.57%
BR6OX1/CYP85A1
61
0.57%
7DLH
58
0.54%
BBE
56
0.52%
COR
55
0.51%
F5H/CYP84A
52
0.48%
TAT
51
0.48%
FNS
47
0.44%
ANS/LDOX
44
0.41%
DFR
43
0.4%
LAMT
41
0.38%
CPD/CYP90A1
41
0.38%
8HGO
34
0.32%
ROT3/CYP90C1
32
0.3%
HMGR
32
0.3%
CCoAOMT
31
0.29%
MPO
30
0.28%
16OMT
27
0.25%
CNMT
26
0.24%
AACT
26
0.24%
CYP51G1
24
0.22%
CYP719
22
0.21%
CHS
22
0.21%
HPPR
22
0.21%
PAL
21
0.2%
CPR
20
0.19%
DET2
19
0.18%
FPPS
19
0.18%
TYDC_DDC
17
0.16%
GGPPS
17
0.16%
CYP80B1
15
0.14%
ISY
15
0.14%
MVK
14
0.13%
6OMT_4OMT_SOMT
12
0.11%
SMO1/SMO2
12
0.11%
DXS
12
0.11%
MVD
12
0.11%
PMK
11
0.1%
TDC
10
0.09%
MCT/IspD
9
0.08%
ODC
8
0.07%
SQS/FDFT1
8
0.07%
IDI
8
0.07%
DWF1
7
0.07%
HDR/IspH
7
0.07%
XMT_MXMT_DXMT
6
0.06%
ADC
6
0.06%
CYP80F1
6
0.06%
HYD1
6
0.06%
CMK/IspE
6
0.06%
CHI
5
0.05%
DXR
5
0.05%
CPI1
4
0.04%
DWF5
4
0.04%
HDS/IspG
4
0.04%
MDS/IspF
4
0.04%
HMGS
4
0.04%
FLS
3
0.03%
FK
3
0.03%
DWF7
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1297 | 20 | BAHD (475) | View species results |
| Alkaloid pathway | 966 | 27 | 7DLGT (141) | View species results |
| Phenylpropanoid pathway | 887 | 13 | POD (324) | View species results |
| Flavonoid pathway | 464 | 14 | UFGT (273) | View species results |
| Rosmarinic acid pathway | 358 | 7 | C4H (167) | View species results |
| Steroid pathway | 308 | 13 | CAS (117) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 4247 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 756 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| fragaria_chiloensis_augustus_masked-2D-processed-gene-245.182-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_augustus_masked-2D-processed-gene-89.23-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_augustus_masked-3B-processed-gene-238.107-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_augustus_masked-3C-processed-gene-261.19-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_augustus_masked-5A-processed-gene-97.9-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_augustus_masked-5B-processed-gene-183.105-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_augustus_masked-5B-processed-gene-232.24-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2A-augustus-gene-165.16-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-2A-augustus-gene-20.15-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2A-augustus-gene-21.167-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2A-augustus-gene-21.168-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2B-augustus-gene-121.55-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2B-augustus-gene-264.3-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2C-augustus-gene-177.142-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2C-augustus-gene-22.115-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2D-augustus-gene-245.16-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-2D-augustus-gene-89.13-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-3A-augustus-gene-77.85-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_maker-5A-augustus-gene-52.7-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5A-augustus-gene-52.9-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5B-augustus-gene-232.1-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-5C-augustus-gene-113.91-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5C-augustus-gene-59.84-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-5C-augustus-gene-59.85-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5C-augustus-gene-59.86-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5D-augustus-gene-48.121-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-5D-augustus-gene-94.17-mRNA-1 | Alkaloid | 8HGO | medium | pass |
| fragaria_chiloensis_maker-6C-augustus-gene-282.119-mRNA-1 | Alkaloid | 8HGO | low | borderline |
| fragaria_chiloensis_maker-7A-augustus-gene-227.1-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-7B-augustus-gene-1.99-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-7C-augustus-gene-231.164-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_maker-7D-augustus-gene-1.176-mRNA-1 | Alkaloid | 8HGO | medium | borderline |
| fragaria_chiloensis_augustus_masked-2B-processed-gene-84.14-mRNA-1 | Alkaloid | ADC | medium | pass |
| fragaria_chiloensis_augustus_masked-7A-processed-gene-43.31-mRNA-1 | Alkaloid | ADC | medium | pass |
| fragaria_chiloensis_maker-2A-exonerate_protein2genome-gene-204.23-mRNA-1 | Alkaloid | ADC | medium | pass |
| fragaria_chiloensis_maker-2C-exonerate_protein2genome-gene-217.0-mRNA-1 | Alkaloid | ADC | medium | pass |
| fragaria_chiloensis_maker-2D-exonerate_protein2genome-gene-125.19-mRNA-1 | Alkaloid | ADC | medium | pass |
| fragaria_chiloensis_maker-7A-exonerate_protein2genome-gene-105.21-mRNA-1 | Alkaloid | ADC | low | borderline |
| fragaria_chiloensis_augustus_masked-1B-processed-gene-23.166-mRNA-1 | Alkaloid | BBE | low | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-253.179-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-253.181-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.68-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.71-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.72-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.74-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.75-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.76-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.77-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.78-mRNA-1 | Alkaloid | BBE | medium | borderline |
| fragaria_chiloensis_augustus_masked-3A-processed-gene-254.80-mRNA-1 | Alkaloid | BBE | medium | borderline |