Fragaria nilgerrensis (fragaria_nilgerrensis)
Imported from atlas release summary for Fragaria nilgerrensis.
1502
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1502
Candidate Genes
C4H
6.59%
C3'H/CYP98A
6.38%
BAHD
5.33%
UGT
4.4%
7DLGT
4.32%
UFGT
4.3%
IFS
4.03%
CYP76
3.48%
Other Families
61.17%
More Families (96)
T3O
118
3.11%
POD
118
3.11%
4CL
117
3.08%
F3H
109
2.87%
BR6OX2/CYP85A2
88
2.32%
F3'H/CYP75B
84
2.21%
DWF4/CYP90B1
84
2.21%
CAD
72
1.9%
CODM/T6ODM
70
1.85%
NMT
69
1.82%
H6H
59
1.56%
STR
55
1.45%
LAC
53
1.4%
CAS
48
1.27%
CYP71
46
1.21%
CYP90D1
45
1.19%
SMT1/SMT2/SMT3
44
1.16%
T16H
43
1.13%
SLS
42
1.11%
7DLH
41
1.08%
GS
40
1.05%
GES
39
1.03%
TPS
39
1.03%
TRI/TRII
37
0.98%
CSE
35
0.92%
HCT
35
0.92%
IFR
30
0.79%
ANR
30
0.79%
TAT
29
0.76%
SGD
28
0.74%
BR6OX1/CYP85A1
27
0.71%
F5H/CYP84A
24
0.63%
F3'5'H/CYP75A
23
0.61%
IO
22
0.58%
RAS
22
0.58%
PMT
21
0.55%
CCR
21
0.55%
PYKS
20
0.53%
COR
19
0.5%
G8O/G8H
19
0.5%
CPD/CYP90A1
19
0.5%
FNS
18
0.47%
COMT
18
0.47%
ANS/LDOX
17
0.45%
NCS
16
0.42%
BBE
16
0.42%
CCoAOMT
13
0.34%
LAMT
12
0.32%
GGPPS
12
0.32%
16OMT
11
0.29%
8HGO
11
0.29%
CYP51G1
11
0.29%
SQE
11
0.29%
HMGR
10
0.26%
MPO
9
0.24%
PAL
9
0.24%
HPPR
9
0.24%
ROT3/CYP90C1
9
0.24%
DFR
8
0.21%
CNMT
7
0.18%
FPPS
7
0.18%
AACT
7
0.18%
CHS
6
0.16%
DET2
6
0.16%
CYP719
5
0.13%
TYDC_DDC
5
0.13%
ISY
5
0.13%
CPR
5
0.13%
SQS/FDFT1
5
0.13%
TDC
4
0.11%
SMO1/SMO2
4
0.11%
MVD
4
0.11%
DXS
4
0.11%
CYP80B1
3
0.08%
6OMT_4OMT_SOMT
3
0.08%
ODC
3
0.08%
IDI
3
0.08%
MVK
3
0.08%
XMT_MXMT_DXMT
2
0.05%
ADC
2
0.05%
CHI
2
0.05%
DWF5
2
0.05%
DWF1
2
0.05%
PMK
2
0.05%
CMK/IspE
2
0.05%
HDR/IspH
2
0.05%
MCT/IspD
2
0.05%
CYP80F1
1
0.03%
FK
1
0.03%
HYD1
1
0.03%
DWF7
1
0.03%
CPI1
1
0.03%
HDS/IspG
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 454 | 19 | BAHD (166) | View species results |
| Alkaloid pathway | 348 | 20 | 7DLGT (68) | View species results |
| Phenylpropanoid pathway | 291 | 11 | POD (107) | View species results |
| Flavonoid pathway | 199 | 9 | UFGT (150) | View species results |
| Rosmarinic acid pathway | 113 | 7 | C4H (43) | View species results |
| Steroid pathway | 97 | 13 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1531 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 259 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| FnilGWHABKC000000060228940.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| FnilGWHABKC000000060230750.1 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| FnilGWHABKC000000060231590.1 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| FnilGWHABKC000000060231740.1 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| FnilGWHABKC000000060234290.1 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| FnilGWHABKC000000060234940.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| FnilGWHABKC000000060235090.1 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| FnilGWHABKC000000060235190.1 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| FnilGWHABKC000000060235200.1 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| FnilGWHABKC000000060235240.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| FnilGWHABKC000000060235430.1 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| FnilGWHABKC000000060236090.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| FnilGWHABKC000000060239030.1 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| FnilGWHABKC000000060240060.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| FnilGWHABKC000000060240830.1 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| FnilGWHABKC000000060246170.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| FnilGWHABKC000000060247900.1 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| FnilGWHABKC000000070253210.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| FnilGWHABKC000000070255170.1 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| FnilGWHABKC000000070255220.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| FnilGWHABKC000000070255510.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| FnilGWHABKC000000070256900.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| FnilGWHABKC000000070260360.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| FnilGWHABKC000000070260610.1 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| FnilGWHABKC000000070260690.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| FnilGWHABKC000000070262200.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| FnilGWHABKC000000070262290.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| FnilGWHABKC000000070263370.1 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| FnilGWHABKC000000070266440.1 | Terpenoid | BAHD | medium | pass | BAHD__00028__sp_O80467_SDT_ARATH |
| FnilGWHABKC000000070266450.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| FnilGWHABKC000000070266480.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| FnilGWHABKC000000070268010.1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| FnilGWHABKC000000070271610.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| FnilGWHABKC000000070272790.1 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| FnilGWHABKC000000070272850.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| FnilGWHABKC000000070273020.1 | Terpenoid | BAHD | medium | pass | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |
| FnilGWHABKC000000070273210.1 | Terpenoid | BAHD | medium | pass | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |
| FnilGWHABKC000000170275460.1 | Terpenoid | BAHD | low | borderline | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| FnilGWHABKC000000180275570.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| FnilGWHABKC000000540277250.1 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| FnilGWHABKC000000820278650.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| FnilGWHABKC000000880278980.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| FnilGWHABKC000000980279670.1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| FnilGWHABKC000000980279750.1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| FnilGWHABKC000001070280290.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| FnilGWHABKC000001110280720.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| FnilGWHABKC000001210281050.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| FnilGWHABKC000001360281840.1 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| FnilGWHABKC000001430282150.1 | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| FnilGWHABKC000001430282230.1 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |