Funaria hygrometrica (funaria_hygrometrica)
Imported from atlas release summary for Funaria hygrometrica.
648
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
648
Candidate Genes
POD
7.0%
BAHD
6.44%
4CL
6.32%
C4H
5.02%
C3'H/CYP98A
4.52%
NMT
4.27%
CYP76
3.41%
STR
3.34%
Other Families
59.69%
More Families (95)
IFS
44
2.72%
PAL
42
2.6%
F3H
39
2.41%
IFR
37
2.29%
PYKS
36
2.23%
T3O
35
2.17%
DWF4/CYP90B1
33
2.04%
CODM/T6ODM
31
1.92%
SMT1/SMT2/SMT3
30
1.86%
BR6OX2/CYP85A2
29
1.8%
F3'H/CYP75B
27
1.67%
GS
25
1.55%
CYP71
24
1.49%
TRI/TRII
22
1.36%
CSE
21
1.3%
UFGT
19
1.18%
SGD
18
1.11%
7DLGT
18
1.11%
UGT
18
1.11%
H6H
16
0.99%
CHS
16
0.99%
CAD
16
0.99%
IO
13
0.8%
HCT
13
0.8%
LAC
13
0.8%
RAS
13
0.8%
TDC
12
0.74%
CNMT
11
0.68%
T16H
11
0.68%
COMT
11
0.68%
CAS
11
0.68%
PMT
9
0.56%
SLS
9
0.56%
G8O/G8H
8
0.5%
8HGO
8
0.5%
CPD/CYP90A1
8
0.5%
SQS/FDFT1
8
0.5%
CYP80B1
7
0.43%
COR
7
0.43%
CCR
7
0.43%
CPR
7
0.43%
GGPPS
7
0.43%
7DLH
6
0.37%
MPO
6
0.37%
DFR
6
0.37%
F3'5'H/CYP75A
6
0.37%
ANR
6
0.37%
SMO1/SMO2
6
0.37%
CYP90D1
6
0.37%
TYDC_DDC
5
0.31%
FNS
5
0.31%
TAT
5
0.31%
DET2
5
0.31%
CYP51G1
5
0.31%
MVK
5
0.31%
IDI
5
0.31%
AACT
5
0.31%
BBE
4
0.25%
NCS
4
0.25%
LAMT
4
0.25%
CHI
4
0.25%
FLS
4
0.25%
HDS/IspG
4
0.25%
DXS
4
0.25%
MCT/IspD
4
0.25%
MVD
4
0.25%
ADC
3
0.19%
CYP719
3
0.19%
ANS/LDOX
3
0.19%
ROT3/CYP90C1
3
0.19%
HMGR
3
0.19%
FPPS
3
0.19%
HDR/IspH
3
0.19%
GES
2
0.12%
16OMT
2
0.12%
F5H/CYP84A
2
0.12%
CCoAOMT
2
0.12%
HPPR
2
0.12%
SQE
2
0.12%
DWF5
2
0.12%
BR6OX1/CYP85A1
2
0.12%
DWF1
2
0.12%
HYD1
2
0.12%
TPS
2
0.12%
CMK/IspE
2
0.12%
DXR
2
0.12%
HMGS
2
0.12%
ISY
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
ODC
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
MDS/IspF
1
0.06%
PMK
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 192 | 10 | POD (107) | View species results |
| Terpenoid pathway | 156 | 19 | BAHD (72) | View species results |
| Alkaloid pathway | 123 | 14 | NMT (24) | View species results |
| Flavonoid pathway | 66 | 8 | UFGT (16) | View species results |
| Rosmarinic acid pathway | 66 | 7 | C4H (21) | View species results |
| Steroid pathway | 45 | 13 | SMT1/SMT2/SMT3 (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 490 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 130 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Fhygscaffold_100015400 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_100015420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_100018650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_100018670 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_10003430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_110030810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_120033810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_120038990 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_120044150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_120044170 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_130049160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_130056930 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_140073970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_140078190 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_1480087990 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_160106350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_170108590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_170115730 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_180132580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_180140580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_200174060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_200177650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_20164300 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_20171550 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_210188620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_210190060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_230221380 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_230223710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_230225960 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_240246520 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_240247770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_240248310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_2510261750 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_260264730 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_30285920 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_30287240 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_40290900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_40295260 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_40297890 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_40297900 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_50313060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_50313590 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_50314870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_60327870 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Fhygscaffold_60330710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_60332110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_70341270 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_80347320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_80347390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Fhygscaffold_80352660 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |