PlantSME Plant secondary metabolism enzyme database

Funaria hygrometrica (funaria_hygrometrica)

Imported from atlas release summary for Funaria hygrometrica.

648
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 192 10 POD (107) View species results
Terpenoid pathway 156 19 BAHD (72) View species results
Alkaloid pathway 123 14 NMT (24) View species results
Flavonoid pathway 66 8 UFGT (16) View species results
Rosmarinic acid pathway 66 7 C4H (21) View species results
Steroid pathway 45 13 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 490 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 130 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Fhygscaffold_160104900 Alkaloid NMT low borderline
Fhygscaffold_160104990 Alkaloid NMT low borderline
Fhygscaffold_170112920 Alkaloid NMT medium borderline
Fhygscaffold_170118830 Alkaloid NMT low borderline
Fhygscaffold_170120260 Alkaloid NMT medium borderline
Fhygscaffold_180129760 Alkaloid NMT low borderline
Fhygscaffold_180130230 Alkaloid NMT low borderline
Fhygscaffold_180132320 Alkaloid NMT low borderline
Fhygscaffold_180136040 Alkaloid NMT low borderline
Fhygscaffold_180140090 Alkaloid NMT low borderline
Fhygscaffold_180142150 Alkaloid NMT medium pass
Fhygscaffold_190155080 Alkaloid NMT low borderline
Fhygscaffold_200177100 Alkaloid NMT low borderline
Fhygscaffold_200185320 Alkaloid NMT medium pass
Fhygscaffold_20162650 Alkaloid NMT medium pass
Fhygscaffold_20162660 Alkaloid NMT medium pass
Fhygscaffold_20170710 Alkaloid NMT medium pass
Fhygscaffold_20172120 Alkaloid NMT low borderline
Fhygscaffold_210189010 Alkaloid NMT medium borderline
Fhygscaffold_210191790 Alkaloid NMT medium pass
Fhygscaffold_210199810 Alkaloid NMT medium borderline
Fhygscaffold_210202390 Alkaloid NMT low borderline
Fhygscaffold_220203610 Alkaloid NMT low borderline
Fhygscaffold_220207430 Alkaloid NMT medium pass
Fhygscaffold_230216380 Alkaloid NMT medium borderline
Fhygscaffold_230222250 Alkaloid NMT medium pass
Fhygscaffold_240230490 Alkaloid NMT low borderline
Fhygscaffold_240230700 Alkaloid NMT low borderline
Fhygscaffold_240237880 Alkaloid NMT medium pass
Fhygscaffold_240237980 Alkaloid NMT medium pass
Fhygscaffold_240242330 Alkaloid NMT low borderline
Fhygscaffold_250253180 Alkaloid NMT medium borderline
Fhygscaffold_250253770 Alkaloid NMT low borderline
Fhygscaffold_250259270 Alkaloid NMT low borderline
Fhygscaffold_250260370 Alkaloid NMT medium pass
Fhygscaffold_260269330 Alkaloid NMT low borderline
Fhygscaffold_260271950 Alkaloid NMT low borderline
Fhygscaffold_2660274840 Alkaloid NMT low borderline
Fhygscaffold_30276870 Alkaloid NMT medium pass
Fhygscaffold_30281060 Alkaloid NMT low borderline
Fhygscaffold_50314110 Alkaloid NMT low borderline
Fhygscaffold_50317350 Alkaloid NMT low borderline
Fhygscaffold_70341820 Alkaloid NMT medium pass
Fhygscaffold_80354640 Alkaloid NMT medium borderline
Fhygscaffold_80356460 Alkaloid NMT low borderline
Fhygscaffold_80359150 Alkaloid NMT medium pass
Fhygscaffold_90362110 Alkaloid NMT medium borderline
Fhygscaffold_90362380 Alkaloid NMT medium borderline
Fhygscaffold_90367130 Alkaloid NMT medium pass
Fhygscaffold_70339460 Alkaloid ODC low borderline