Gastrodia elata (gastrodia_elata)
Imported from atlas release summary for Gastrodia elata.
878
Candidate Protein Records
699
Pathway-Level Records
1820
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1820
Family-Level Calls
C4H
7.03%
C3'H/CYP98A
6.48%
BAHD
5.6%
4CL
4.62%
T3O
4.07%
IFS
3.85%
POD
3.52%
CYP76
3.46%
Other Families
61.37%
More Families (95)
UGT
60
3.3%
NMT
57
3.13%
7DLGT
54
2.97%
UFGT
54
2.97%
F3'H/CYP75B
51
2.8%
STR
45
2.47%
BR6OX2/CYP85A2
44
2.42%
CYP71
44
2.42%
DWF4/CYP90B1
37
2.03%
F3H
36
1.98%
CAD
30
1.65%
GS
24
1.32%
PYKS
22
1.21%
SMT1/SMT2/SMT3
22
1.21%
TPS
21
1.15%
SLS
20
1.1%
CODM/T6ODM
19
1.04%
CYP90D1
19
1.04%
GES
18
0.99%
PAL
18
0.99%
CAS
18
0.99%
G8O/G8H
17
0.93%
IFR
16
0.88%
LAC
16
0.88%
CSE
14
0.77%
CYP51G1
14
0.77%
H6H
13
0.71%
SGD
13
0.71%
T16H
12
0.66%
NCS
12
0.66%
COMT
12
0.66%
TRI/TRII
11
0.6%
CHS
11
0.6%
ANR
11
0.6%
F5H/CYP84A
10
0.55%
IO
9
0.49%
CNMT
9
0.49%
FNS
9
0.49%
CCR
9
0.49%
RAS
9
0.49%
ROT3/CYP90C1
9
0.49%
BBE
8
0.44%
PMT
7
0.38%
16OMT
7
0.38%
HPPR
7
0.38%
8HGO
6
0.33%
F3'5'H/CYP75A
6
0.33%
GGPPS
6
0.33%
LAMT
5
0.27%
MPO
5
0.27%
CYP719
5
0.27%
SQS/FDFT1
5
0.27%
DET2
5
0.27%
AACT
5
0.27%
DFR
4
0.22%
CCoAOMT
4
0.22%
HCT
4
0.22%
CPR
4
0.22%
TAT
4
0.22%
FPPS
4
0.22%
XMT_MXMT_DXMT
3
0.16%
7DLH
3
0.16%
ISY
3
0.16%
ANS/LDOX
3
0.16%
CHI
3
0.16%
BR6OX1/CYP85A1
3
0.16%
CPD/CYP90A1
3
0.16%
HMGR
3
0.16%
HMGS
3
0.16%
IDI
3
0.16%
MVK
3
0.16%
COR
2
0.11%
ADC
2
0.11%
6OMT_4OMT_SOMT
2
0.11%
CYP80B1
2
0.11%
FLS
2
0.11%
CPI1
2
0.11%
SMO1/SMO2
2
0.11%
MVD
2
0.11%
CMK/IspE
2
0.11%
HDR/IspH
2
0.11%
TDC
1
0.05%
TYDC_DDC
1
0.05%
SQE
1
0.05%
HYD1
1
0.05%
FK
1
0.05%
DWF1
1
0.05%
DWF5
1
0.05%
DWF7
1
0.05%
HDS/IspG
1
0.05%
MCT/IspD
1
0.05%
DXS
1
0.05%
PMK
1
0.05%
DXR
1
0.05%
MDS/IspF
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 196 | 19 | BAHD (74) | View species results |
| Alkaloid pathway | 161 | 18 | NMT (35) | View species results |
| Phenylpropanoid pathway | 138 | 12 | POD (61) | View species results |
| Flavonoid pathway | 98 | 9 | UFGT (51) | View species results |
| Rosmarinic acid pathway | 70 | 7 | C4H (30) | View species results |
| Steroid pathway | 36 | 12 | SMT1/SMT2/SMT3 (15) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 761 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 115 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| GelaGWHAAEX000002120172750.1 | Terpenoid | CYP76 | low | borderline |
| GelaGWHAAEX000002140173460.1 | Terpenoid | CYP76 | medium | borderline |
| GelaGWHAAEX000002620183530.1 | Terpenoid | CYP76 | medium | borderline |
| GelaGWHAAEX000003200186780.1 | Terpenoid | CYP76 | medium | borderline |
| GelaGWHAAEX000003200186790.1 | Terpenoid | CYP76 | medium | pass |
| GelaGWHAAEX000003560187440.1 | Terpenoid | CYP76 | medium | borderline |
| GelaGWHAAEX000003560187450.1 | Terpenoid | CYP76 | medium | borderline |
| GelaGWHAAEX000002240175840.1 | Terpenoid | DXR | medium | pass |
| GelaGWHAAEX000001180132290.1 | Terpenoid | DXS | medium | pass |
| GelaGWHAAEX000000020001710.1 | Terpenoid | FPPS | medium | pass |
| GelaGWHAAEX000000040003790.1 | Terpenoid | FPPS | medium | pass |
| GelaGWHAAEX000000690090840.1 | Terpenoid | FPPS | medium | pass |
| GelaGWHAAEX000002020169810.1 | Terpenoid | FPPS | medium | pass |
| GelaGWHAAEX000000030002790.1 | Terpenoid | GGPPS | medium | borderline |
| GelaGWHAAEX000000400057720.1 | Terpenoid | GGPPS | medium | borderline |
| GelaGWHAAEX000001070124090.1 | Terpenoid | GGPPS | medium | borderline |
| GelaGWHAAEX000001420144710.1 | Terpenoid | GGPPS | medium | borderline |
| GelaGWHAAEX000002330177310.1 | Terpenoid | GGPPS | low | borderline |
| GelaGWHAAEX000002330177320.1 | Terpenoid | GGPPS | low | borderline |
| GelaGWHAAEX000000360054310.1 | Terpenoid | HDR/IspH | high | pass |
| GelaGWHAAEX000000740095030.1 | Terpenoid | HDR/IspH | low | borderline |
| GelaGWHAAEX000000110020810.1 | Terpenoid | HDS/IspG | medium | pass |
| GelaGWHAAEX000000100015250.1 | Terpenoid | HMGR | medium | pass |
| GelaGWHAAEX000000620081780.1 | Terpenoid | HMGR | medium | pass |
| GelaGWHAAEX000001890164810.1 | Terpenoid | HMGR | medium | pass |
| GelaGWHAAEX000000240041950.1 | Terpenoid | HMGS | high | pass |
| GelaGWHAAEX000000610080180.1 | Terpenoid | HMGS | low | borderline |
| GelaGWHAAEX000001990168160.1 | Terpenoid | HMGS | low | borderline |
| GelaGWHAAEX000000510071130.1 | Terpenoid | IDI | medium | pass |
| GelaGWHAAEX000000540074370.1 | Terpenoid | IDI | medium | pass |
| GelaGWHAAEX000000700091580.1 | Terpenoid | IDI | low | borderline |
| GelaGWHAAEX000000350053970.1 | Terpenoid | MCT/IspD | high | pass |
| GelaGWHAAEX000002330177380.1 | Terpenoid | MDS/IspF | high | pass |
| GelaGWHAAEX000000070009360.1 | Terpenoid | MVD | medium | pass |
| GelaGWHAAEX000002000168560.1 | Terpenoid | MVD | low | borderline |
| GelaGWHAAEX000000970115470.1 | Terpenoid | MVK | low | borderline |
| GelaGWHAAEX000001290137070.1 | Terpenoid | MVK | low | borderline |
| GelaGWHAAEX000002530181930.1 | Terpenoid | MVK | medium | pass |
| GelaGWHAAEX000001910165420.1 | Terpenoid | PMK | medium | pass |
| GelaGWHAAEX000000050005750.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000380056700.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000380056710.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000410059080.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000410059540.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000730094480.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000730094490.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000730094510.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000000920111130.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000001050122990.1 | Terpenoid | TPS | medium | pass |
| GelaGWHAAEX000001050123000.1 | Terpenoid | TPS | medium | pass |