Glycine max (glycine_max)
Imported from atlas release summary for Glycine max.
3565
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3565
Candidate Genes
BAHD
6.27%
C3'H/CYP98A
5.16%
C4H
5.11%
4CL
5.05%
POD
4.81%
NMT
3.81%
IFS
3.39%
UGT
3.32%
Other Families
63.09%
More Families (96)
UFGT
263
3.18%
F3H
257
3.11%
T3O
255
3.09%
7DLGT
253
3.06%
CYP76
238
2.88%
STR
212
2.57%
DWF4/CYP90B1
169
2.05%
CODM/T6ODM
162
1.96%
SMT1/SMT2/SMT3
155
1.88%
F3'H/CYP75B
137
1.66%
CYP71
137
1.66%
H6H
127
1.54%
CAS
115
1.39%
SGD
110
1.33%
BR6OX2/CYP85A2
102
1.23%
CAD
101
1.22%
LAC
101
1.22%
TRI/TRII
93
1.13%
CSE
92
1.11%
IFR
86
1.04%
CYP90D1
81
0.98%
RAS
80
0.97%
COMT
77
0.93%
HCT
72
0.87%
T16H
70
0.85%
CCR
65
0.79%
GS
64
0.77%
PYKS
63
0.76%
PMT
58
0.7%
16OMT
52
0.63%
ANR
51
0.62%
IO
50
0.61%
BBE
49
0.59%
COR
48
0.58%
TPS
46
0.56%
MPO
44
0.53%
GES
44
0.53%
8HGO
43
0.52%
SLS
43
0.52%
TAT
43
0.52%
FNS
40
0.48%
G8O/G8H
38
0.46%
DFR
38
0.46%
CPD/CYP90A1
35
0.42%
BR6OX1/CYP85A1
35
0.42%
LAMT
34
0.41%
7DLH
34
0.41%
PAL
33
0.4%
NCS
32
0.39%
F3'5'H/CYP75A
32
0.39%
ANS/LDOX
32
0.39%
DXS
29
0.35%
CNMT
28
0.34%
CPR
28
0.34%
CCoAOMT
27
0.33%
F5H/CYP84A
26
0.31%
CHS
25
0.3%
CYP51G1
25
0.3%
ROT3/CYP90C1
25
0.3%
SQS/FDFT1
25
0.3%
ADC
20
0.24%
SQE
16
0.19%
SMO1/SMO2
15
0.18%
GGPPS
15
0.18%
DET2
13
0.16%
AACT
13
0.16%
TDC
12
0.15%
CHI
12
0.15%
MVD
12
0.15%
HMGR
11
0.13%
MVK
11
0.13%
CYP719
10
0.12%
FPPS
10
0.12%
XMT_MXMT_DXMT
9
0.11%
HMGS
9
0.11%
HDS/IspG
9
0.11%
DXR
8
0.1%
FLS
7
0.08%
HPPR
7
0.08%
CPI1
7
0.08%
TYDC_DDC
6
0.07%
ISY
6
0.07%
MCT/IspD
6
0.07%
HYD1
5
0.06%
CMK/IspE
5
0.06%
DWF1
4
0.05%
PMK
4
0.05%
HDR/IspH
4
0.05%
ODC
3
0.04%
FK
3
0.04%
CYP80B1
2
0.02%
6OMT_4OMT_SOMT
2
0.02%
DWF7
2
0.02%
IDI
2
0.02%
DWF5
1
0.01%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 930 | 19 | BAHD (425) | View species results |
| Phenylpropanoid pathway | 847 | 11 | POD (383) | View species results |
| Alkaloid pathway | 832 | 21 | NMT (201) | View species results |
| Flavonoid pathway | 419 | 11 | UFGT (244) | View species results |
| Rosmarinic acid pathway | 278 | 7 | C4H (100) | View species results |
| Steroid pathway | 259 | 12 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2672 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 670 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gmax01G0000440.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmax01G0000440.2 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmax01G0005740.1 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| Gmax01G0012880.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Gmax01G0012880.2 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Gmax01G0016280.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax01G0016280.2 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax01G0016280.3 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax01G0017090.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Gmax01G0018620.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmax01G0018620.2 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmax01G0018850.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmax01G0018850.2 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmax01G0018850.3 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmax01G0020350.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmax01G0020350.2 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmax02G0001260.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax02G0001260.2 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax02G0001260.3 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax02G0001260.4 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax02G0001260.5 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax02G0004770.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Gmax02G0004770.2 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Gmax02G0006070.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax02G0006070.2 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax02G0006070.3 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax02G0006070.4 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmax02G0009450.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmax02G0009450.2 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmax02G0028330.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gmax02G0028330.2 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gmax03G0010400.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Gmax03G0010400.2 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Gmax03G0014930.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Gmax03G0014930.2 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Gmax03G0014930.3 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Gmax03G0019720.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax03G0019720.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax03G0020160.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax03G0020160.2 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax03G0020160.3 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax03G0020160.4 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax03G0020610.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmax03G0023170.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.2 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.3 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.4 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.5 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.6 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmax03G0023170.7 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |