Glycine max (glycine_max)
Imported from atlas release summary for Glycine max.
4416
Candidate Protein Records
3565
Pathway-Level Records
8260
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8260
Family-Level Calls
BAHD
6.27%
C3'H/CYP98A
5.16%
C4H
5.11%
4CL
5.05%
POD
4.81%
NMT
3.81%
IFS
3.39%
UGT
3.32%
Other Families
63.09%
More Families (96)
UFGT
263
3.18%
F3H
257
3.11%
T3O
255
3.09%
7DLGT
253
3.06%
CYP76
238
2.88%
STR
212
2.57%
DWF4/CYP90B1
169
2.05%
CODM/T6ODM
162
1.96%
SMT1/SMT2/SMT3
155
1.88%
F3'H/CYP75B
137
1.66%
CYP71
137
1.66%
H6H
127
1.54%
CAS
115
1.39%
SGD
110
1.33%
BR6OX2/CYP85A2
102
1.23%
CAD
101
1.22%
LAC
101
1.22%
TRI/TRII
93
1.13%
CSE
92
1.11%
IFR
86
1.04%
CYP90D1
81
0.98%
RAS
80
0.97%
COMT
77
0.93%
HCT
72
0.87%
T16H
70
0.85%
CCR
65
0.79%
GS
64
0.77%
PYKS
63
0.76%
PMT
58
0.7%
16OMT
52
0.63%
ANR
51
0.62%
IO
50
0.61%
BBE
49
0.59%
COR
48
0.58%
TPS
46
0.56%
MPO
44
0.53%
GES
44
0.53%
8HGO
43
0.52%
SLS
43
0.52%
TAT
43
0.52%
FNS
40
0.48%
G8O/G8H
38
0.46%
DFR
38
0.46%
CPD/CYP90A1
35
0.42%
BR6OX1/CYP85A1
35
0.42%
LAMT
34
0.41%
7DLH
34
0.41%
PAL
33
0.4%
NCS
32
0.39%
F3'5'H/CYP75A
32
0.39%
ANS/LDOX
32
0.39%
DXS
29
0.35%
CNMT
28
0.34%
CPR
28
0.34%
CCoAOMT
27
0.33%
F5H/CYP84A
26
0.31%
CHS
25
0.3%
CYP51G1
25
0.3%
ROT3/CYP90C1
25
0.3%
SQS/FDFT1
25
0.3%
ADC
20
0.24%
SQE
16
0.19%
SMO1/SMO2
15
0.18%
GGPPS
15
0.18%
DET2
13
0.16%
AACT
13
0.16%
TDC
12
0.15%
CHI
12
0.15%
MVD
12
0.15%
HMGR
11
0.13%
MVK
11
0.13%
CYP719
10
0.12%
FPPS
10
0.12%
XMT_MXMT_DXMT
9
0.11%
HMGS
9
0.11%
HDS/IspG
9
0.11%
DXR
8
0.1%
FLS
7
0.08%
HPPR
7
0.08%
CPI1
7
0.08%
TYDC_DDC
6
0.07%
ISY
6
0.07%
MCT/IspD
6
0.07%
HYD1
5
0.06%
CMK/IspE
5
0.06%
DWF1
4
0.05%
PMK
4
0.05%
HDR/IspH
4
0.05%
ODC
3
0.04%
FK
3
0.04%
CYP80B1
2
0.02%
6OMT_4OMT_SOMT
2
0.02%
DWF7
2
0.02%
IDI
2
0.02%
DWF5
1
0.01%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 930 | 19 | BAHD (425) | View species results |
| Phenylpropanoid pathway | 847 | 11 | POD (383) | View species results |
| Alkaloid pathway | 832 | 21 | NMT (201) | View species results |
| Flavonoid pathway | 419 | 11 | UFGT (244) | View species results |
| Rosmarinic acid pathway | 278 | 7 | C4H (100) | View species results |
| Steroid pathway | 259 | 12 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2672 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 670 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gmax04G0013920.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gmax04G0019770.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gmax04G0021940.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax04G0021940.2 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Gmax04G0022800.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmax04G0023610.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax04G0023610.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax05G0005820.1 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Gmax05G0023550.1 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax05G0023550.2 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax05G0023550.3 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax06G0002040.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Gmax06G0007330.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Gmax06G0010600.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0010600.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0010600.3 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0010600.4 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0010600.5 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0011610.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmax06G0011610.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmax06G0012640.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmax06G0013540.2 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Gmax06G0015000.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gmax06G0021140.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gmax06G0021710.2 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Gmax06G0021710.3 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Gmax06G0021710.7 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Gmax06G0028230.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmax06G0028230.2 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmax06G0028230.3 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmax06G0028230.4 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmax06G0028230.5 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmax07G0002270.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Gmax07G0004940.1 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmax07G0004940.2 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmax07G0004950.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmax07G0005680.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Gmax07G0010020.1 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax07G0010020.2 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax07G0010020.3 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax07G0010020.4 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax07G0012310.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmax07G0012310.2 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmax07G0012310.3 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmax07G0015160.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Gmax07G0021500.1 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| Gmax07G0023280.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Gmax07G0023280.2 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Gmax08G0004900.1 | Alkaloid | NMT | medium | pass | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gmax08G0004910.1 | Alkaloid | NMT | medium | pass | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |