PlantSME Plant secondary metabolism enzyme database

Gollania philippinensis (gollania_philippinensis)

Imported from atlas release summary for Gollania philippinensis.

872
Candidate Protein Records
632
Pathway-Level Records
1684
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 26.58% Terpenoid pathway 23.89% Alkaloid pathway 19.62% Rosmarinic acid pathway 11.71% Flavonoid pathway 11.55% Steroid pathway 6.65%
Family Distribution
C3'H/CYP98A 6.77% C4H 6.65% POD 5.34% BAHD 5.17% CYP76 4.99% 4CL 4.45% IFS 4.04% NMT 3.56%
Other Families 59.03%
More Families (95)
BR6OX2/CYP85A2 43 2.55% PAL 42 2.49% DWF4/CYP90B1 41 2.43% IFR 40 2.38% F3'H/CYP75B 39 2.32% IO 38 2.26% T3O 35 2.08% GS 34 2.02% STR 34 2.02% F3H 33 1.96% PYKS 24 1.43% UFGT 23 1.37% UGT 23 1.37% TRI/TRII 21 1.25% CAS 21 1.25% 7DLGT 20 1.19% CAD 20 1.19% CODM/T6ODM 19 1.13% SMT1/SMT2/SMT3 19 1.13% CYP71 19 1.13% 7DLH 17 1.01% CYP90D1 16 0.95% H6H 15 0.89% CHS 15 0.89% CSE 15 0.89% COMT 15 0.89% F3'5'H/CYP75A 13 0.77% G8O/G8H 12 0.71% CYP80B1 12 0.71% SLS 11 0.65% NCS 11 0.65% LAMT 10 0.59% SGD 10 0.59% RAS 10 0.59% T16H 9 0.53% 8HGO 9 0.53% HCT 9 0.53% 16OMT 8 0.48% LAC 8 0.48% CPD/CYP90A1 8 0.48% COR 7 0.42% GES 7 0.42% FNS 7 0.42% CNMT 6 0.36% ANR 6 0.36% CCR 6 0.36% CPR 6 0.36% SQS/FDFT1 6 0.36% BR6OX1/CYP85A1 6 0.36% ROT3/CYP90C1 6 0.36% TPS 6 0.36% PMT 5 0.3% BBE 5 0.3% AACT 5 0.3% GGPPS 5 0.3% TDC 4 0.24% CHI 4 0.24% F5H/CYP84A 4 0.24% DWF5 4 0.24% SMO1/SMO2 4 0.24% MVK 4 0.24% MPO 3 0.18% TYDC_DDC 3 0.18% ANS/LDOX 3 0.18% FLS 3 0.18% DFR 3 0.18% TAT 3 0.18% CYP51G1 3 0.18% DET2 3 0.18% ADC 2 0.12% 6OMT_4OMT_SOMT 2 0.12% CYP80F1 2 0.12% CCoAOMT 2 0.12% FPPS 2 0.12% HMGS 2 0.12% HDR/IspH 2 0.12% HDS/IspG 2 0.12% MVD 2 0.12% CMK/IspE 2 0.12% ISY 1 0.06% CYP719 1 0.06% HPPR 1 0.06% DWF1 1 0.06% HYD1 1 0.06% FK 1 0.06% SQE 1 0.06% DWF7 1 0.06% CPI1 1 0.06% HMGR 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% PMK 1 0.06% DXS 1 0.06% IDI 1 0.06% MCT/IspD 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 10 POD (80) View species results
Terpenoid pathway 151 19 BAHD (60) View species results
Alkaloid pathway 124 18 NMT (25) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Flavonoid pathway 73 11 UFGT (19) View species results
Steroid pathway 42 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 713 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Gphi387940212190 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Gphi388000215070 Alkaloid NMT low borderline NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Gphi388310225980 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Gphi388500234580 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Gphi388920252820 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Gphi388950255450 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Gphi388960255620 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
Gphi389160266400 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Gphi389310270510 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Gphi389310270810 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH