Gossypium sturtianum (gossypium_sturtianum)
/
Imported from atlas release summary for Gossypium sturtianum.
1938
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1938
Candidate Genes
C4H
7.19%
C3'H/CYP98A
6.2%
BAHD
5.2%
CYP76
3.85%
IFS
3.79%
T3O
3.75%
4CL
3.57%
POD
3.46%
Other Families
62.99%
More Families (97)
UGT
171
3.44%
7DLGT
165
3.32%
UFGT
165
3.32%
F3H
164
3.3%
DWF4/CYP90B1
118
2.38%
F3'H/CYP75B
95
1.91%
BR6OX2/CYP85A2
94
1.89%
STR
91
1.83%
NMT
88
1.77%
CODM/T6ODM
86
1.73%
CAD
86
1.73%
H6H
73
1.47%
CAS
71
1.43%
LAC
70
1.41%
CYP90D1
70
1.41%
CYP71
69
1.39%
GES
64
1.29%
TPS
64
1.29%
TRI/TRII
56
1.13%
SMT1/SMT2/SMT3
56
1.13%
CSE
53
1.07%
7DLH
50
1.01%
HCT
50
1.01%
COMT
49
0.99%
BBE
48
0.97%
GS
43
0.87%
16OMT
39
0.79%
PYKS
38
0.77%
RAS
38
0.77%
IO
36
0.73%
IFR
34
0.68%
NCS
31
0.62%
T16H
31
0.62%
ANR
31
0.62%
G8O/G8H
30
0.6%
SGD
29
0.58%
PMT
27
0.54%
F3'5'H/CYP75A
26
0.52%
SLS
24
0.48%
PAL
24
0.48%
F5H/CYP84A
24
0.48%
FNS
23
0.46%
CPD/CYP90A1
23
0.46%
CCR
22
0.44%
TAT
22
0.44%
COR
21
0.42%
ROT3/CYP90C1
20
0.4%
CYP51G1
18
0.36%
8HGO
17
0.34%
CNMT
15
0.3%
SQE
15
0.3%
GGPPS
15
0.3%
LAMT
14
0.28%
BR6OX1/CYP85A1
13
0.26%
ANS/LDOX
12
0.24%
DFR
11
0.22%
CCoAOMT
11
0.22%
FPPS
11
0.22%
CHS
10
0.2%
TYDC_DDC
9
0.18%
CPR
9
0.18%
MPO
8
0.16%
ISY
8
0.16%
SQS/FDFT1
8
0.16%
SMO1/SMO2
8
0.16%
HMGR
8
0.16%
MVK
8
0.16%
DET2
7
0.14%
AACT
7
0.14%
HPPR
6
0.12%
MVD
6
0.12%
DXS
6
0.12%
CYP80B1
5
0.1%
ODC
4
0.08%
ADC
4
0.08%
CHI
4
0.08%
HDR/IspH
4
0.08%
TDC
3
0.06%
CYP719
3
0.06%
DWF5
3
0.06%
GPPS
3
0.06%
HMGS
3
0.06%
MCT/IspD
3
0.06%
DXR
3
0.06%
HDS/IspG
3
0.06%
PMK
3
0.06%
CYP80F1
2
0.04%
XMT_MXMT_DXMT
2
0.04%
FLS
2
0.04%
DWF1
2
0.04%
DWF7
2
0.04%
MDS/IspF
2
0.04%
FK
1
0.02%
CPI1
1
0.02%
HYD1
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 550 | 21 | BAHD (202) | View species results |
| Alkaloid pathway | 434 | 21 | 7DLGT (80) | View species results |
| Phenylpropanoid pathway | 432 | 11 | POD (165) | View species results |
| Flavonoid pathway | 241 | 10 | UFGT (156) | View species results |
| Rosmarinic acid pathway | 156 | 7 | C4H (61) | View species results |
| Steroid pathway | 125 | 11 | CAS (58) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1981 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 346 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gossypium_sturtianum_Gstu01G004620 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu01G017090 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu02G016710 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu03G022100 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu03G022110 | Alkaloid | 8HGO | medium | pass | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu03G022130 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu03G022150 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu04G013390 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu06G024860 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu06G024870 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu07G018890 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu07G026240 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu08G003080 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu08G018290 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu10G028140 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu11G006520 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| gossypium_sturtianum_Gstu11G006530 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |