PlantSME Plant secondary metabolism enzyme database

Handroanthus impetiginosus (handroanthus_impetiginosus)

Imported from atlas release summary for Handroanthus impetiginosus.

1782
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.1% Alkaloid pathway 22.17% Phenylpropanoid pathway 19.47% Flavonoid pathway 11.56% Steroid pathway 7.41% Rosmarinic acid pathway 7.3%
Family Distribution
C4H 5.97% C3'H/CYP98A 5.94% BAHD 5.57% UGT 3.97% CYP76 3.85% 7DLGT 3.66% T3O 3.59% IFS 3.57%
Other Families 63.88%
More Families (95)
UFGT 151 3.55% F3H 138 3.24% 4CL 138 3.24% POD 138 3.24% TPS 100 2.35% GES 97 2.28% CODM/T6ODM 94 2.21% DWF4/CYP90B1 90 2.11% SMT1/SMT2/SMT3 81 1.9% CAD 79 1.86% F3'H/CYP75B 77 1.81% NMT 73 1.71% BR6OX2/CYP85A2 72 1.69% STR 67 1.57% CAS 59 1.39% CYP71 58 1.36% H6H 57 1.34% COMT 57 1.34% SGD 49 1.15% LAC 47 1.1% NCS 42 0.99% 16OMT 40 0.94% CSE 40 0.94% CPD/CYP90A1 38 0.89% TRI/TRII 37 0.87% TAT 36 0.85% IFR 34 0.8% GS 33 0.78% T16H 33 0.78% RAS 33 0.78% CYP90D1 33 0.78% HCT 32 0.75% PYKS 29 0.68% IO 28 0.66% ANR 25 0.59% FNS 24 0.56% LAMT 23 0.54% F3'5'H/CYP75A 22 0.52% ANS/LDOX 21 0.49% 7DLH 20 0.47% F5H/CYP84A 20 0.47% COR 18 0.42% G8O/G8H 17 0.4% CNMT 16 0.38% PMT 15 0.35% PAL 15 0.35% CCR 15 0.35% GGPPS 15 0.35% CYP80B1 14 0.33% FPPS 14 0.33% SLS 13 0.31% ISY 12 0.28% MPO 11 0.26% 6OMT_4OMT_SOMT 11 0.26% BR6OX1/CYP85A1 10 0.23% 8HGO 9 0.21% CYP80F1 8 0.19% CCoAOMT 8 0.19% CYP51G1 8 0.19% DFR 7 0.16% DET2 7 0.16% SMO1/SMO2 7 0.16% ROT3/CYP90C1 7 0.16% SQE 7 0.16% CHS 6 0.14% MVK 6 0.14% CYP719 5 0.12% TYDC_DDC 5 0.12% HPPR 5 0.12% HDS/IspG 5 0.12% DXS 5 0.12% BBE 4 0.09% CHI 4 0.09% AACT 4 0.09% HMGR 4 0.09% HDR/IspH 4 0.09% TDC 3 0.07% ADC 3 0.07% CPR 3 0.07% SQS/FDFT1 3 0.07% MVD 3 0.07% XMT_MXMT_DXMT 2 0.05% DWF1 2 0.05% IDI 2 0.05% MCT/IspD 2 0.05% HMGS 2 0.05% FLS 1 0.02% DWF7 1 0.02% HYD1 1 0.02% DWF5 1 0.02% FK 1 0.02% GPPS 1 0.02% PMK 1 0.02% DXR 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 18 BAHD (199) View species results
Alkaloid pathway 395 25 GES (84) View species results
Phenylpropanoid pathway 347 11 POD (132) View species results
Flavonoid pathway 206 12 UFGT (137) View species results
Steroid pathway 132 11 SMT1/SMT2/SMT3 (61) View species results
Rosmarinic acid pathway 130 7 C4H (62) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1549 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 6OMT_4OMT_SOMT
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Gene Pathway Family Confidence Status Best Target
HimpHimp2_scaffold_1490045660.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
HimpHimp2_scaffold_26320103600.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_26320103620.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
HimpHimp2_scaffold_28760115950.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_37290148810.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_38080151650.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_51080195590.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
HimpHimp2_scaffold_55900211500.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
HimpHimp2_scaffold_59780221770.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_60360223170.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
HimpHimp2_scaffold_62370228070.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA