PlantSME Plant secondary metabolism enzyme database

Handroanthus impetiginosus (handroanthus_impetiginosus)

Imported from atlas release summary for Handroanthus impetiginosus.

1782
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.1% Alkaloid pathway 22.17% Phenylpropanoid pathway 19.47% Flavonoid pathway 11.56% Steroid pathway 7.41% Rosmarinic acid pathway 7.3%
Family Distribution
C4H 5.97% C3'H/CYP98A 5.94% BAHD 5.57% UGT 3.97% CYP76 3.85% 7DLGT 3.66% T3O 3.59% IFS 3.57%
Other Families 63.88%
More Families (95)
UFGT 151 3.55% F3H 138 3.24% 4CL 138 3.24% POD 138 3.24% TPS 100 2.35% GES 97 2.28% CODM/T6ODM 94 2.21% DWF4/CYP90B1 90 2.11% SMT1/SMT2/SMT3 81 1.9% CAD 79 1.86% F3'H/CYP75B 77 1.81% NMT 73 1.71% BR6OX2/CYP85A2 72 1.69% STR 67 1.57% CAS 59 1.39% CYP71 58 1.36% H6H 57 1.34% COMT 57 1.34% SGD 49 1.15% LAC 47 1.1% NCS 42 0.99% 16OMT 40 0.94% CSE 40 0.94% CPD/CYP90A1 38 0.89% TRI/TRII 37 0.87% TAT 36 0.85% IFR 34 0.8% GS 33 0.78% T16H 33 0.78% RAS 33 0.78% CYP90D1 33 0.78% HCT 32 0.75% PYKS 29 0.68% IO 28 0.66% ANR 25 0.59% FNS 24 0.56% LAMT 23 0.54% F3'5'H/CYP75A 22 0.52% ANS/LDOX 21 0.49% 7DLH 20 0.47% F5H/CYP84A 20 0.47% COR 18 0.42% G8O/G8H 17 0.4% CNMT 16 0.38% PMT 15 0.35% PAL 15 0.35% CCR 15 0.35% GGPPS 15 0.35% CYP80B1 14 0.33% FPPS 14 0.33% SLS 13 0.31% ISY 12 0.28% MPO 11 0.26% 6OMT_4OMT_SOMT 11 0.26% BR6OX1/CYP85A1 10 0.23% 8HGO 9 0.21% CYP80F1 8 0.19% CCoAOMT 8 0.19% CYP51G1 8 0.19% DFR 7 0.16% DET2 7 0.16% SMO1/SMO2 7 0.16% ROT3/CYP90C1 7 0.16% SQE 7 0.16% CHS 6 0.14% MVK 6 0.14% CYP719 5 0.12% TYDC_DDC 5 0.12% HPPR 5 0.12% HDS/IspG 5 0.12% DXS 5 0.12% BBE 4 0.09% CHI 4 0.09% AACT 4 0.09% HMGR 4 0.09% HDR/IspH 4 0.09% TDC 3 0.07% ADC 3 0.07% CPR 3 0.07% SQS/FDFT1 3 0.07% MVD 3 0.07% XMT_MXMT_DXMT 2 0.05% DWF1 2 0.05% IDI 2 0.05% MCT/IspD 2 0.05% HMGS 2 0.05% FLS 1 0.02% DWF7 1 0.02% HYD1 1 0.02% DWF5 1 0.02% FK 1 0.02% GPPS 1 0.02% PMK 1 0.02% DXR 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 18 BAHD (199) View species results
Alkaloid pathway 395 25 GES (84) View species results
Phenylpropanoid pathway 347 11 POD (132) View species results
Flavonoid pathway 206 12 UFGT (137) View species results
Steroid pathway 132 11 SMT1/SMT2/SMT3 (61) View species results
Rosmarinic acid pathway 130 7 C4H (62) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1549 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
HimpHimp2_scaffold_26490104150.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
HimpHimp2_scaffold_33460135490.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
HimpHimp2_scaffold_51490196640.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
HimpHimp2_scaffold_68890245480.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
HimpHimp2_scaffold_8950286330.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO