Haplomitrium (haplomitrium)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 28.13% Terpenoid pathway 20.77% Alkaloid pathway 20.47% Flavonoid pathway 11.93% Rosmarinic acid pathway 11.19% Steroid pathway 7.51%

Family Distribution

679 Candidate Genes

C4H 9.19% C3'H/CYP98A 6.67% CYP76 5.51% POD 5.25% IFS 4.72% BAHD 4.72% STR 3.15% 4CL 2.99%

Other Families 57.8%

More Families (95)

T3O 56 2.94% NMT 54 2.83% BR6OX2/CYP85A2 49 2.57% F3H 48 2.52% H6H 46 2.41% DWF4/CYP90B1 44 2.31% PYKS 41 2.15% CAS 40 2.1% PAL 39 2.05% CHS 33 1.73% SLS 24 1.26% RAS 24 1.26% SMT1/SMT2/SMT3 24 1.26% IO 23 1.21% G8O/G8H 22 1.15% IFR 22 1.15% F3'H/CYP75B 22 1.15% COMT 19 1.0% F3'5'H/CYP75A 18 0.94% CYP71 18 0.94% HCT 17 0.89% LAMT 15 0.79% 7DLGT 15 0.79% T16H 15 0.79% GS 15 0.79% UFGT 15 0.79% TRI/TRII 14 0.73% CODM/T6ODM 14 0.73% UGT 14 0.73% CYP719 13 0.68% 16OMT 13 0.68% CSE 13 0.68% BR6OX1/CYP85A1 13 0.68% FNS 12 0.63% CPD/CYP90A1 12 0.63% LAC 11 0.58% CAD 11 0.58% CYP51G1 10 0.52% CYP90D1 10 0.52% TPS 9 0.47% F5H/CYP84A 8 0.42% ROT3/CYP90C1 8 0.42% SMO1/SMO2 8 0.42% CNMT 7 0.37% GES 7 0.37% TAT 7 0.37% COR 6 0.31% ANS/LDOX 6 0.31% SGD 5 0.26% PMT 5 0.26% CPR 5 0.26% GGPPS 5 0.26% DXS 5 0.26% AACT 5 0.26% CYP80B1 4 0.21% NCS 4 0.21% 8HGO 4 0.21% 7DLH 4 0.21% ANR 4 0.21% CCR 4 0.21% SQE 4 0.21% MVK 4 0.21% ADC 3 0.16% CCoAOMT 3 0.16% SQS/FDFT1 3 0.16% MCT/IspD 3 0.16% FPPS 3 0.16% ISY 2 0.1% TYDC_DDC 2 0.1% CYP80F1 2 0.1% MPO 2 0.1% XMT_MXMT_DXMT 2 0.1% HPPR 2 0.1% DWF1 2 0.1% DWF5 2 0.1% DET2 2 0.1% IDI 2 0.1% HMGS 2 0.1% PMK 2 0.1% ODC 1 0.05% TDC 1 0.05% 6OMT_4OMT_SOMT 1 0.05% DFR 1 0.05% FLS 1 0.05% HYD1 1 0.05% DWF7 1 0.05% CPI1 1 0.05% FK 1 0.05% HMGR 1 0.05% CMK/IspE 1 0.05% HDS/IspG 1 0.05% HDR/IspH 1 0.05% MVD 1 0.05% MDS/IspF 1 0.05% DXR 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	191	12	POD (94)	View species results
Terpenoid pathway	141	20	BAHD (47)	View species results
Alkaloid pathway	139	17	PYKS (28)	View species results
Flavonoid pathway	81	9	CHS (31)	View species results
Rosmarinic acid pathway	76	7	C4H (40)	View species results
Steroid pathway	51	13	CAS (19)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	872	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	131	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: 4CL

Gene	Pathway	Family	Confidence	Status	Best Target
Haplomitrium10273780014980	Flavonoid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Haplomitrium10371400018850	Flavonoid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium10690760047670	Flavonoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium10769930058350	Flavonoid	4CL	low	borderline	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10776970059730	Flavonoid	4CL	low	borderline	4CL__00003__sp_M4ISH0_CCL1_HUMLU
Haplomitrium10884140083240	Flavonoid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Haplomitrium10918680096210	Flavonoid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10971830123210	Flavonoid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10973670124400	Flavonoid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Haplomitrium10973880124550	Flavonoid	4CL	low	borderline	4CL__00009__sp_Q67W82_4CL4_ORYSJ
Haplomitrium10992820135100	Flavonoid	4CL	medium	pass	4CL__00002__sp_I3PB37_4CL1_PETHY
Haplomitrium11061810170300	Flavonoid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium11789670187600	Flavonoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium11789680187640	Flavonoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium15670199580	Flavonoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium16660201000	Flavonoid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium18100202290	Flavonoid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Haplomitrium21830206100	Flavonoid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Haplomitrium7037250226230	Flavonoid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium10273780014980	Phenylpropanoid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Haplomitrium10371400018850	Phenylpropanoid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium10690760047670	Phenylpropanoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium10769930058350	Phenylpropanoid	4CL	low	borderline	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10776970059730	Phenylpropanoid	4CL	low	borderline	4CL__00003__sp_M4ISH0_CCL1_HUMLU
Haplomitrium10884140083240	Phenylpropanoid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Haplomitrium10918680096210	Phenylpropanoid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10971830123210	Phenylpropanoid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10973670124400	Phenylpropanoid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Haplomitrium10973880124550	Phenylpropanoid	4CL	low	borderline	4CL__00009__sp_Q67W82_4CL4_ORYSJ
Haplomitrium10992820135100	Phenylpropanoid	4CL	medium	pass	4CL__00002__sp_I3PB37_4CL1_PETHY
Haplomitrium11061810170300	Phenylpropanoid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium11789670187600	Phenylpropanoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium11789680187640	Phenylpropanoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium15670199580	Phenylpropanoid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium16660201000	Phenylpropanoid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium18100202290	Phenylpropanoid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Haplomitrium21830206100	Phenylpropanoid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Haplomitrium7037250226230	Phenylpropanoid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium10273780014980	Rosmarinic Acid	4CL	low	borderline	4CL__00014__sp_Q84P24_4CLL6_ARATH
Haplomitrium10371400018850	Rosmarinic Acid	4CL	medium	pass	4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Haplomitrium10690760047670	Rosmarinic Acid	4CL	low	borderline	4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Haplomitrium10769930058350	Rosmarinic Acid	4CL	low	borderline	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10776970059730	Rosmarinic Acid	4CL	low	borderline	4CL__00003__sp_M4ISH0_CCL1_HUMLU
Haplomitrium10884140083240	Rosmarinic Acid	4CL	low	borderline	4CL__00018__sp_Q9S777_4CL3_ARATH
Haplomitrium10918680096210	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10971830123210	Rosmarinic Acid	4CL	medium	pass	4CL__00004__sp_O24146_4CL2_TOBAC
Haplomitrium10973670124400	Rosmarinic Acid	4CL	medium	pass	4CL__00001__sp_I3PB36_CNL_PETHY
Haplomitrium10973880124550	Rosmarinic Acid	4CL	low	borderline	4CL__00009__sp_Q67W82_4CL4_ORYSJ
Haplomitrium10992820135100	Rosmarinic Acid	4CL	medium	pass	4CL__00002__sp_I3PB37_4CL1_PETHY
Haplomitrium11061810170300	Rosmarinic Acid	4CL	low	borderline	4CL__00016__sp_Q9M0X9_4CLL7_ARATH