Haplomitrium (haplomitrium)
Imported from atlas release summary for Haplomitrium.
945
Candidate Protein Records
679
Pathway-Level Records
1905
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1905
Family-Level Calls
C4H
9.19%
C3'H/CYP98A
6.67%
CYP76
5.51%
POD
5.25%
IFS
4.72%
BAHD
4.72%
STR
3.15%
4CL
2.99%
Other Families
57.8%
More Families (95)
T3O
56
2.94%
NMT
54
2.83%
BR6OX2/CYP85A2
49
2.57%
F3H
48
2.52%
H6H
46
2.41%
DWF4/CYP90B1
44
2.31%
PYKS
41
2.15%
CAS
40
2.1%
PAL
39
2.05%
CHS
33
1.73%
SLS
24
1.26%
RAS
24
1.26%
SMT1/SMT2/SMT3
24
1.26%
IO
23
1.21%
G8O/G8H
22
1.15%
IFR
22
1.15%
F3'H/CYP75B
22
1.15%
COMT
19
1.0%
F3'5'H/CYP75A
18
0.94%
CYP71
18
0.94%
HCT
17
0.89%
LAMT
15
0.79%
7DLGT
15
0.79%
T16H
15
0.79%
GS
15
0.79%
UFGT
15
0.79%
TRI/TRII
14
0.73%
CODM/T6ODM
14
0.73%
UGT
14
0.73%
CYP719
13
0.68%
16OMT
13
0.68%
CSE
13
0.68%
BR6OX1/CYP85A1
13
0.68%
FNS
12
0.63%
CPD/CYP90A1
12
0.63%
LAC
11
0.58%
CAD
11
0.58%
CYP51G1
10
0.52%
CYP90D1
10
0.52%
TPS
9
0.47%
F5H/CYP84A
8
0.42%
ROT3/CYP90C1
8
0.42%
SMO1/SMO2
8
0.42%
CNMT
7
0.37%
GES
7
0.37%
TAT
7
0.37%
COR
6
0.31%
ANS/LDOX
6
0.31%
SGD
5
0.26%
PMT
5
0.26%
CPR
5
0.26%
GGPPS
5
0.26%
DXS
5
0.26%
AACT
5
0.26%
CYP80B1
4
0.21%
NCS
4
0.21%
8HGO
4
0.21%
7DLH
4
0.21%
ANR
4
0.21%
CCR
4
0.21%
SQE
4
0.21%
MVK
4
0.21%
ADC
3
0.16%
CCoAOMT
3
0.16%
SQS/FDFT1
3
0.16%
MCT/IspD
3
0.16%
FPPS
3
0.16%
ISY
2
0.1%
TYDC_DDC
2
0.1%
CYP80F1
2
0.1%
MPO
2
0.1%
XMT_MXMT_DXMT
2
0.1%
HPPR
2
0.1%
DWF1
2
0.1%
DWF5
2
0.1%
DET2
2
0.1%
IDI
2
0.1%
HMGS
2
0.1%
PMK
2
0.1%
ODC
1
0.05%
TDC
1
0.05%
6OMT_4OMT_SOMT
1
0.05%
DFR
1
0.05%
FLS
1
0.05%
HYD1
1
0.05%
DWF7
1
0.05%
CPI1
1
0.05%
FK
1
0.05%
HMGR
1
0.05%
CMK/IspE
1
0.05%
HDS/IspG
1
0.05%
HDR/IspH
1
0.05%
MVD
1
0.05%
MDS/IspF
1
0.05%
DXR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 191 | 12 | POD (94) | View species results |
| Terpenoid pathway | 141 | 20 | BAHD (47) | View species results |
| Alkaloid pathway | 139 | 17 | PYKS (28) | View species results |
| Flavonoid pathway | 81 | 9 | CHS (31) | View species results |
| Rosmarinic acid pathway | 76 | 7 | C4H (40) | View species results |
| Steroid pathway | 51 | 13 | CAS (19) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 872 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 131 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Haplomitrium10860720076600 | Alkaloid | T3O | medium | borderline |
| Haplomitrium10861210076990 | Alkaloid | T3O | low | borderline |
| Haplomitrium10923830098580 | Alkaloid | T3O | medium | borderline |
| Haplomitrium10930660102470 | Alkaloid | T3O | medium | pass |
| Haplomitrium10944970108140 | Alkaloid | T3O | medium | pass |
| Haplomitrium10971480122910 | Alkaloid | T3O | medium | borderline |
| Haplomitrium10997350137350 | Alkaloid | T3O | medium | borderline |
| Haplomitrium10998990138470 | Alkaloid | T3O | medium | pass |
| Haplomitrium11008290143220 | Alkaloid | T3O | medium | borderline |
| Haplomitrium11025880152620 | Alkaloid | T3O | medium | pass |
| Haplomitrium11036700158560 | Alkaloid | T3O | medium | borderline |
| Haplomitrium11037230158720 | Alkaloid | T3O | medium | pass |
| Haplomitrium11040800160740 | Alkaloid | T3O | medium | pass |
| Haplomitrium11058020168760 | Alkaloid | T3O | medium | pass |
| Haplomitrium11064410171290 | Alkaloid | T3O | medium | pass |
| Haplomitrium11071400174170 | Alkaloid | T3O | medium | pass |
| Haplomitrium11840760188060 | Alkaloid | T3O | medium | pass |
| Haplomitrium11840800188070 | Alkaloid | T3O | medium | pass |
| Haplomitrium12382960195660 | Alkaloid | T3O | medium | borderline |
| Haplomitrium24810208990 | Alkaloid | T3O | low | borderline |
| Haplomitrium6840225390 | Alkaloid | T3O | medium | borderline |
| Haplomitrium7667030231400 | Alkaloid | T3O | medium | borderline |
| Haplomitrium7755530234390 | Alkaloid | T3O | low | borderline |
| Haplomitrium8346160241140 | Alkaloid | T3O | medium | borderline |
| Haplomitrium8890242250 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9140470244120 | Alkaloid | T3O | low | borderline |
| Haplomitrium9222980247350 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9388730249360 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9657290253030 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9675840254330 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9676770254530 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9676830254560 | Alkaloid | T3O | medium | borderline |
| Haplomitrium9803860261220 | Alkaloid | T3O | medium | borderline |
| Haplomitrium11080660177100 | Alkaloid | TDC | low | borderline |
| Haplomitrium10292800016390 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium10381820019440 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium10752630055210 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium10821510067780 | Alkaloid | TRI/TRII | low | borderline |
| Haplomitrium10922400097670 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium10985820130680 | Alkaloid | TRI/TRII | low | borderline |
| Haplomitrium11000690139390 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium12230210190840 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium12230240190910 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium12360530194260 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium12360560194320 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium5910216520 | Alkaloid | TRI/TRII | low | borderline |
| Haplomitrium6919040225530 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium9812910261430 | Alkaloid | TRI/TRII | medium | pass |
| Haplomitrium10565360034840 | Alkaloid | TYDC_DDC | medium | borderline |
| Haplomitrium10936190104530 | Alkaloid | TYDC_DDC | low | borderline |