Hirschfeldia incana (hirschfeldia_incana)
Imported from atlas release summary for Hirschfeldia incana.
1919
Candidate Protein Records
1517
Pathway-Level Records
3584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3584
Family-Level Calls
BAHD
6.67%
C3'H/CYP98A
5.22%
POD
5.19%
C4H
4.91%
4CL
4.19%
F3H
3.88%
UGT
3.74%
UFGT
3.68%
Other Families
62.53%
More Families (95)
7DLGT
130
3.63%
CYP76
120
3.35%
IFS
113
3.15%
T3O
102
2.85%
NMT
94
2.62%
CODM/T6ODM
84
2.34%
STR
74
2.06%
DWF4/CYP90B1
71
1.98%
H6H
60
1.67%
BR6OX2/CYP85A2
57
1.59%
CYP71
53
1.48%
F3'H/CYP75B
48
1.34%
SGD
47
1.31%
CSE
47
1.31%
SMT1/SMT2/SMT3
47
1.31%
CAD
46
1.28%
PYKS
45
1.26%
IFR
44
1.23%
TRI/TRII
42
1.17%
BBE
35
0.98%
LAC
35
0.98%
RAS
34
0.95%
COMT
33
0.92%
ANR
31
0.86%
CAS
31
0.86%
LAMT
30
0.84%
T16H
30
0.84%
16OMT
26
0.73%
GS
26
0.73%
TAT
26
0.73%
HCT
25
0.7%
IO
23
0.64%
F3'5'H/CYP75A
22
0.61%
CCR
22
0.61%
CYP90D1
22
0.61%
PAL
21
0.59%
GES
18
0.5%
8HGO
18
0.5%
TPS
18
0.5%
FNS
17
0.47%
CPD/CYP90A1
16
0.45%
FPPS
16
0.45%
ANS/LDOX
15
0.42%
NCS
14
0.39%
PMT
14
0.39%
SLS
14
0.39%
G8O/G8H
13
0.36%
CYP51G1
13
0.36%
COR
12
0.33%
F5H/CYP84A
12
0.33%
CPR
12
0.33%
CCoAOMT
11
0.31%
BR6OX1/CYP85A1
11
0.31%
SQE
11
0.31%
GGPPS
11
0.31%
AACT
11
0.31%
7DLH
9
0.25%
CNMT
9
0.25%
SQS/FDFT1
9
0.25%
CYP719
8
0.22%
CHS
8
0.22%
TDC
7
0.2%
MVK
7
0.2%
TYDC_DDC
6
0.17%
MPO
6
0.17%
DET2
6
0.17%
ROT3/CYP90C1
6
0.17%
MVD
6
0.17%
ISY
5
0.14%
ADC
5
0.14%
CHI
5
0.14%
DFR
5
0.14%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
DWF7
5
0.14%
MCT/IspD
5
0.14%
HMGR
4
0.11%
IDI
4
0.11%
DXS
4
0.11%
CYP80B1
3
0.08%
CYP80F1
2
0.06%
XMT_MXMT_DXMT
2
0.06%
DWF1
2
0.06%
FK
2
0.06%
DWF5
2
0.06%
CPI1
2
0.06%
HMGS
2
0.06%
MDS/IspF
2
0.06%
CMK/IspE
2
0.06%
HDR/IspH
2
0.06%
DXR
2
0.06%
FLS
1
0.03%
HYD1
1
0.03%
HDS/IspG
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 437 | 19 | BAHD (192) | View species results |
| Phenylpropanoid pathway | 360 | 11 | POD (175) | View species results |
| Alkaloid pathway | 312 | 17 | 7DLGT (52) | View species results |
| Flavonoid pathway | 192 | 10 | UFGT (127) | View species results |
| Rosmarinic acid pathway | 124 | 7 | C4H (42) | View species results |
| Steroid pathway | 92 | 11 | CAS (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1131 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 298 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| hirschfeldia_incana_HINC_NIJ_V1_G0282870.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0283270.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0283460.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0285680.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0289540.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0291050.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0291310.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0291320.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0298950.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0301060.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0306860.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0306870.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0306890.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0306900.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0306910.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0306920.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0306930.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0310150.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0312160.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0312680.1 | Rosmarinic Acid | C4H | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0313350.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0313360.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0319690.1 | Rosmarinic Acid | C4H | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0322810.1 | Rosmarinic Acid | C4H | low | borderline |