Hirschfeldia incana (hirschfeldia_incana)
Imported from atlas release summary for Hirschfeldia incana.
1517
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1517
Candidate Genes
BAHD
6.67%
C3'H/CYP98A
5.22%
POD
5.19%
C4H
4.91%
4CL
4.19%
F3H
3.88%
UGT
3.74%
UFGT
3.68%
Other Families
62.53%
More Families (95)
7DLGT
130
3.63%
CYP76
120
3.35%
IFS
113
3.15%
T3O
102
2.85%
NMT
94
2.62%
CODM/T6ODM
84
2.34%
STR
74
2.06%
DWF4/CYP90B1
71
1.98%
H6H
60
1.67%
BR6OX2/CYP85A2
57
1.59%
CYP71
53
1.48%
F3'H/CYP75B
48
1.34%
SGD
47
1.31%
CSE
47
1.31%
SMT1/SMT2/SMT3
47
1.31%
CAD
46
1.28%
PYKS
45
1.26%
IFR
44
1.23%
TRI/TRII
42
1.17%
BBE
35
0.98%
LAC
35
0.98%
RAS
34
0.95%
COMT
33
0.92%
ANR
31
0.86%
CAS
31
0.86%
LAMT
30
0.84%
T16H
30
0.84%
16OMT
26
0.73%
GS
26
0.73%
TAT
26
0.73%
HCT
25
0.7%
IO
23
0.64%
F3'5'H/CYP75A
22
0.61%
CCR
22
0.61%
CYP90D1
22
0.61%
PAL
21
0.59%
GES
18
0.5%
8HGO
18
0.5%
TPS
18
0.5%
FNS
17
0.47%
CPD/CYP90A1
16
0.45%
FPPS
16
0.45%
ANS/LDOX
15
0.42%
NCS
14
0.39%
PMT
14
0.39%
SLS
14
0.39%
G8O/G8H
13
0.36%
CYP51G1
13
0.36%
COR
12
0.33%
F5H/CYP84A
12
0.33%
CPR
12
0.33%
CCoAOMT
11
0.31%
BR6OX1/CYP85A1
11
0.31%
SQE
11
0.31%
GGPPS
11
0.31%
AACT
11
0.31%
7DLH
9
0.25%
CNMT
9
0.25%
SQS/FDFT1
9
0.25%
CYP719
8
0.22%
CHS
8
0.22%
TDC
7
0.2%
MVK
7
0.2%
TYDC_DDC
6
0.17%
MPO
6
0.17%
DET2
6
0.17%
ROT3/CYP90C1
6
0.17%
MVD
6
0.17%
ISY
5
0.14%
ADC
5
0.14%
CHI
5
0.14%
DFR
5
0.14%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
DWF7
5
0.14%
MCT/IspD
5
0.14%
HMGR
4
0.11%
IDI
4
0.11%
DXS
4
0.11%
CYP80B1
3
0.08%
CYP80F1
2
0.06%
XMT_MXMT_DXMT
2
0.06%
DWF1
2
0.06%
FK
2
0.06%
DWF5
2
0.06%
CPI1
2
0.06%
HMGS
2
0.06%
MDS/IspF
2
0.06%
CMK/IspE
2
0.06%
HDR/IspH
2
0.06%
DXR
2
0.06%
FLS
1
0.03%
HYD1
1
0.03%
HDS/IspG
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 437 | 19 | BAHD (192) | View species results |
| Phenylpropanoid pathway | 360 | 11 | POD (175) | View species results |
| Alkaloid pathway | 312 | 17 | 7DLGT (52) | View species results |
| Flavonoid pathway | 192 | 10 | UFGT (127) | View species results |
| Rosmarinic acid pathway | 124 | 7 | C4H (42) | View species results |
| Steroid pathway | 92 | 11 | CAS (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1131 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 298 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| hirschfeldia_incana_HINC_NIJ_V1_G0004850.1 | Alkaloid | SGD | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0009900.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0038540.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0056070.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0056080.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0056090.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0061700.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0068770.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0068780.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073060.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073080.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073090.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073100.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073110.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073120.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073130.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0073140.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0086030.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0097000.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0097010.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0097020.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0097030.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0097040.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0098720.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0105540.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0105550.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0137550.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0160110.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0171160.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0171170.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0171180.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0179180.1 | Alkaloid | SGD | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0189290.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0191650.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0207550.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0211030.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0228510.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0230960.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0240320.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0240330.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0262770.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0274690.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0275380.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0276920.1 | Alkaloid | SGD | low | borderline |
| hirschfeldia_incana_HINC_NIJ_V1_G0297390.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0298270.1 | Alkaloid | SGD | medium | pass |
| hirschfeldia_incana_HINC_NIJ_V1_G0313070.1 | Alkaloid | SGD | medium | pass |