PlantSME Plant secondary metabolism enzyme database

Hypopterygium elatum (hypopterygium_elatum)

Imported from atlas release summary for Hypopterygium elatum.

529
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.84% Terpenoid pathway 24.76% Alkaloid pathway 21.17% Flavonoid pathway 11.15% Rosmarinic acid pathway 10.02% Steroid pathway 6.05%
Family Distribution
BAHD 6.52% POD 5.64% C4H 5.57% 4CL 5.27% C3'H/CYP98A 4.91% NMT 4.32% CYP76 3.96% IFS 3.15%
Other Families 60.66%
More Families (96)
STR 39 2.86% PAL 39 2.86% IFR 36 2.64% BR6OX2/CYP85A2 30 2.2% F3H 29 2.12% T3O 28 2.05% UGT 27 1.98% GS 26 1.9% F3'H/CYP75B 24 1.76% SMT1/SMT2/SMT3 24 1.76% PYKS 22 1.61% CAD 20 1.47% 7DLGT 19 1.39% UFGT 19 1.39% CYP71 19 1.39% DWF4/CYP90B1 17 1.25% H6H 16 1.17% TRI/TRII 15 1.1% CODM/T6ODM 15 1.1% CYP90D1 14 1.03% IO 13 0.95% LAMT 13 0.95% SLS 12 0.88% SGD 11 0.81% CHS 11 0.81% HCT 11 0.81% CSE 11 0.81% ANR 10 0.73% COMT 10 0.73% CPD/CYP90A1 10 0.73% CAS 10 0.73% G8O/G8H 9 0.66% FNS 9 0.66% T16H 8 0.59% COR 8 0.59% 8HGO 8 0.59% LAC 8 0.59% CNMT 7 0.51% NCS 7 0.51% PMT 6 0.44% CYP80B1 6 0.44% BBE 6 0.44% CCR 6 0.44% RAS 6 0.44% BR6OX1/CYP85A1 6 0.44% SQS/FDFT1 6 0.44% TYDC_DDC 5 0.37% 7DLH 5 0.37% DFR 5 0.37% F5H/CYP84A 5 0.37% CPR 5 0.37% GGPPS 5 0.37% MVD 5 0.37% TDC 4 0.29% 16OMT 4 0.29% CHI 4 0.29% F3'5'H/CYP75A 4 0.29% TAT 4 0.29% DET2 4 0.29% DWF5 4 0.29% AACT 4 0.29% ANS/LDOX 3 0.22% SMO1/SMO2 3 0.22% TPS 3 0.22% MVK 3 0.22% MPO 2 0.15% ADC 2 0.15% CYP719 2 0.15% CCoAOMT 2 0.15% DWF1 2 0.15% FK 2 0.15% IDI 2 0.15% MCT/IspD 2 0.15% FPPS 2 0.15% PMK 2 0.15% HMGS 2 0.15% HDR/IspH 2 0.15% GES 1 0.07% 6OMT_4OMT_SOMT 1 0.07% XMT_MXMT_DXMT 1 0.07% ODC 1 0.07% ISY 1 0.07% FLS 1 0.07% HPPR 1 0.07% DWF7 1 0.07% SQE 1 0.07% HYD1 1 0.07% CYP51G1 1 0.07% ROT3/CYP90C1 1 0.07% CPI1 1 0.07% DXS 1 0.07% MDS/IspF 1 0.07% DXR 1 0.07% HMGR 1 0.07% CMK/IspE 1 0.07% HDS/IspG 1 0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 142 11 POD (74) View species results
Terpenoid pathway 131 19 BAHD (56) View species results
Alkaloid pathway 112 17 NMT (26) View species results
Flavonoid pathway 59 9 UFGT (16) View species results
Rosmarinic acid pathway 53 7 C4H (17) View species results
Steroid pathway 32 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 454 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Hela440910007500 Alkaloid PYKS high pass
Hela469820012880 Alkaloid PYKS medium pass
Hela475550026490 Alkaloid PYKS low borderline
Hela476010033170 Alkaloid PYKS low borderline
Hela476400039070 Alkaloid PYKS high pass
Hela476400039090 Alkaloid PYKS high pass
Hela477630070960 Alkaloid PYKS low borderline
Hela477730076310 Alkaloid PYKS low borderline
Hela477880082830 Alkaloid PYKS high pass
Hela478890137340 Alkaloid PYKS low borderline
Hela479090152030 Alkaloid PYKS high pass
Hela479170158690 Alkaloid PYKS high pass
Hela479170159450 Alkaloid PYKS low borderline
Hela479170159880 Alkaloid PYKS low borderline
Hela479320173630 Alkaloid PYKS low borderline
Hela479440179390 Alkaloid PYKS low borderline
Hela479480180690 Alkaloid PYKS low borderline
Hela479540189090 Alkaloid PYKS low borderline
Hela479630199890 Alkaloid PYKS high pass
Hela479830214280 Alkaloid PYKS high pass
Hela479830214300 Alkaloid PYKS high pass
Hela480410247300 Alkaloid PYKS low borderline