PlantSME Plant secondary metabolism enzyme database

Hypopterygium elatum (hypopterygium_elatum)

Imported from atlas release summary for Hypopterygium elatum.

529
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.84% Terpenoid pathway 24.76% Alkaloid pathway 21.17% Flavonoid pathway 11.15% Rosmarinic acid pathway 10.02% Steroid pathway 6.05%
Family Distribution
BAHD 6.52% POD 5.64% C4H 5.57% 4CL 5.27% C3'H/CYP98A 4.91% NMT 4.32% CYP76 3.96% IFS 3.15%
Other Families 60.66%
More Families (96)
STR 39 2.86% PAL 39 2.86% IFR 36 2.64% BR6OX2/CYP85A2 30 2.2% F3H 29 2.12% T3O 28 2.05% UGT 27 1.98% GS 26 1.9% F3'H/CYP75B 24 1.76% SMT1/SMT2/SMT3 24 1.76% PYKS 22 1.61% CAD 20 1.47% 7DLGT 19 1.39% UFGT 19 1.39% CYP71 19 1.39% DWF4/CYP90B1 17 1.25% H6H 16 1.17% TRI/TRII 15 1.1% CODM/T6ODM 15 1.1% CYP90D1 14 1.03% IO 13 0.95% LAMT 13 0.95% SLS 12 0.88% SGD 11 0.81% CHS 11 0.81% HCT 11 0.81% CSE 11 0.81% ANR 10 0.73% COMT 10 0.73% CPD/CYP90A1 10 0.73% CAS 10 0.73% G8O/G8H 9 0.66% FNS 9 0.66% T16H 8 0.59% COR 8 0.59% 8HGO 8 0.59% LAC 8 0.59% CNMT 7 0.51% NCS 7 0.51% PMT 6 0.44% CYP80B1 6 0.44% BBE 6 0.44% CCR 6 0.44% RAS 6 0.44% BR6OX1/CYP85A1 6 0.44% SQS/FDFT1 6 0.44% TYDC_DDC 5 0.37% 7DLH 5 0.37% DFR 5 0.37% F5H/CYP84A 5 0.37% CPR 5 0.37% GGPPS 5 0.37% MVD 5 0.37% TDC 4 0.29% 16OMT 4 0.29% CHI 4 0.29% F3'5'H/CYP75A 4 0.29% TAT 4 0.29% DET2 4 0.29% DWF5 4 0.29% AACT 4 0.29% ANS/LDOX 3 0.22% SMO1/SMO2 3 0.22% TPS 3 0.22% MVK 3 0.22% MPO 2 0.15% ADC 2 0.15% CYP719 2 0.15% CCoAOMT 2 0.15% DWF1 2 0.15% FK 2 0.15% IDI 2 0.15% MCT/IspD 2 0.15% FPPS 2 0.15% PMK 2 0.15% HMGS 2 0.15% HDR/IspH 2 0.15% GES 1 0.07% 6OMT_4OMT_SOMT 1 0.07% XMT_MXMT_DXMT 1 0.07% ODC 1 0.07% ISY 1 0.07% FLS 1 0.07% HPPR 1 0.07% DWF7 1 0.07% SQE 1 0.07% HYD1 1 0.07% CYP51G1 1 0.07% ROT3/CYP90C1 1 0.07% CPI1 1 0.07% DXS 1 0.07% MDS/IspF 1 0.07% DXR 1 0.07% HMGR 1 0.07% CMK/IspE 1 0.07% HDS/IspG 1 0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 142 11 POD (74) View species results
Terpenoid pathway 131 19 BAHD (56) View species results
Alkaloid pathway 112 17 NMT (26) View species results
Flavonoid pathway 59 9 UFGT (16) View species results
Rosmarinic acid pathway 53 7 C4H (17) View species results
Steroid pathway 32 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 454 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Hela471170013850 Alkaloid T3O medium pass
Hela472060014710 Alkaloid T3O medium borderline
Hela475080022620 Alkaloid T3O medium borderline
Hela475680028540 Alkaloid T3O medium borderline
Hela477040053790 Alkaloid T3O medium borderline
Hela477190058010 Alkaloid T3O medium pass
Hela477200059110 Alkaloid T3O medium borderline
Hela477410063120 Alkaloid T3O medium borderline
Hela477680072920 Alkaloid T3O medium borderline
Hela478590116150 Alkaloid T3O medium borderline
Hela478750128590 Alkaloid T3O medium pass
Hela478900138790 Alkaloid T3O medium borderline
Hela479150155380 Alkaloid T3O medium pass
Hela479150156780 Alkaloid T3O medium borderline
Hela479230165810 Alkaloid T3O medium borderline
Hela479540188320 Alkaloid T3O medium pass
Hela479540189740 Alkaloid T3O medium pass
Hela479540189790 Alkaloid T3O medium pass
Hela479540189800 Alkaloid T3O low borderline
Hela479570194970 Alkaloid T3O medium pass
Hela479570195010 Alkaloid T3O medium pass
Hela479670205970 Alkaloid T3O low borderline
Hela480130233750 Alkaloid T3O medium borderline
Hela480540255510 Alkaloid T3O low borderline
Hela480540255560 Alkaloid T3O low borderline
Hela480670260580 Alkaloid T3O medium pass
Hela480730264250 Alkaloid T3O medium borderline
Hela481010278530 Alkaloid T3O medium pass