Juglans microcarpa x regia (juglans_microcarpa_x_regia)
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Imported from atlas release summary for Juglans microcarpa x regia.
2105
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2105
Candidate Genes
C3'H/CYP98A
5.78%
BAHD
5.61%
C4H
5.57%
4CL
5.17%
POD
4.03%
IFS
3.79%
CYP76
3.67%
NMT
3.63%
Other Families
62.75%
More Families (95)
T3O
165
3.34%
UGT
152
3.08%
UFGT
142
2.88%
7DLGT
140
2.84%
F3H
127
2.57%
DWF4/CYP90B1
103
2.09%
CAS
100
2.03%
CAD
96
1.95%
BR6OX2/CYP85A2
89
1.8%
STR
85
1.72%
CODM/T6ODM
82
1.66%
F3'H/CYP75B
77
1.56%
TRI/TRII
71
1.44%
SMT1/SMT2/SMT3
71
1.44%
SGD
63
1.28%
CYP71
61
1.24%
IFR
58
1.18%
LAC
53
1.07%
H6H
52
1.05%
GS
51
1.03%
GES
50
1.01%
TPS
50
1.01%
COMT
47
0.95%
CYP90D1
47
0.95%
PYKS
45
0.91%
HCT
45
0.91%
CSE
45
0.91%
IO
38
0.77%
PMT
37
0.75%
RAS
36
0.73%
ANR
34
0.69%
TAT
32
0.65%
CNMT
30
0.61%
16OMT
29
0.59%
FNS
29
0.59%
T16H
27
0.55%
BBE
27
0.55%
NCS
26
0.53%
CPD/CYP90A1
26
0.53%
8HGO
24
0.49%
SLS
24
0.49%
LAMT
24
0.49%
7DLH
23
0.47%
COR
23
0.47%
CCR
23
0.47%
BR6OX1/CYP85A1
23
0.47%
PAL
21
0.43%
G8O/G8H
20
0.41%
CPR
19
0.39%
F3'5'H/CYP75A
18
0.36%
SQS/FDFT1
17
0.34%
FPPS
16
0.32%
F5H/CYP84A
14
0.28%
ROT3/CYP90C1
14
0.28%
CCoAOMT
13
0.26%
CYP719
12
0.24%
CHS
12
0.24%
CYP51G1
12
0.24%
DXS
12
0.24%
GGPPS
11
0.22%
MVD
11
0.22%
AACT
11
0.22%
TYDC_DDC
9
0.18%
ANS/LDOX
9
0.18%
DFR
9
0.18%
SQE
9
0.18%
MVK
9
0.18%
MPO
8
0.16%
ISY
8
0.16%
TDC
8
0.16%
FLS
8
0.16%
SMO1/SMO2
7
0.14%
DET2
7
0.14%
HDS/IspG
7
0.14%
CHI
6
0.12%
DWF1
6
0.12%
PMK
5
0.1%
HMGR
4
0.08%
MCT/IspD
4
0.08%
CYP80B1
3
0.06%
HPPR
3
0.06%
CPI1
3
0.06%
HYD1
3
0.06%
DXR
3
0.06%
HMGS
3
0.06%
CMK/IspE
3
0.06%
IDI
3
0.06%
HDR/IspH
3
0.06%
ADC
2
0.04%
DWF5
2
0.04%
DWF7
2
0.04%
MDS/IspF
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
FK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 583 | 19 | BAHD (233) | View species results |
| Alkaloid pathway | 507 | 21 | NMT (109) | View species results |
| Phenylpropanoid pathway | 437 | 11 | POD (193) | View species results |
| Flavonoid pathway | 241 | 9 | UFGT (141) | View species results |
| Steroid pathway | 178 | 12 | CAS (88) | View species results |
| Rosmarinic acid pathway | 159 | 7 | C4H (59) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1725 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 358 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| juglans_microcarpa_x_regia_XP_040986701.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_040986724.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| juglans_microcarpa_x_regia_XP_040986725.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| juglans_microcarpa_x_regia_XP_040987007.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_040987008.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_040987009.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_040987230.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_040987539.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| juglans_microcarpa_x_regia_XP_040988394.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_040988844.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| juglans_microcarpa_x_regia_XP_040988845.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| juglans_microcarpa_x_regia_XP_040989237.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_040990276.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_040992290.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| juglans_microcarpa_x_regia_XP_040994857.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| juglans_microcarpa_x_regia_XP_040998828.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041000835.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| juglans_microcarpa_x_regia_XP_041002091.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_041002092.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_041002482.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041002859.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_041002860.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| juglans_microcarpa_x_regia_XP_041004266.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041004267.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041004672.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| juglans_microcarpa_x_regia_XP_041005012.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005013.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005014.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005015.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005016.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005017.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041005018.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| juglans_microcarpa_x_regia_XP_041007642.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041008053.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008061.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008069.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008077.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008085.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008093.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008102.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008111.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041008120.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| juglans_microcarpa_x_regia_XP_041009902.1 | Flavonoid | 4CL | medium | pass | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| juglans_microcarpa_x_regia_XP_041009998.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| juglans_microcarpa_x_regia_XP_041010440.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| juglans_microcarpa_x_regia_XP_041011102.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| juglans_microcarpa_x_regia_XP_041012318.1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| juglans_microcarpa_x_regia_XP_041012319.1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| juglans_microcarpa_x_regia_XP_041012320.1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| juglans_microcarpa_x_regia_XP_041014783.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |