Juglans microcarpa x regia (juglans_microcarpa_x_regia)
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Imported from atlas release summary for Juglans microcarpa x regia.
2522
Candidate Protein Records
2105
Pathway-Level Records
4934
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4934
Family-Level Calls
C3'H/CYP98A
5.78%
BAHD
5.61%
C4H
5.57%
4CL
5.17%
POD
4.03%
IFS
3.79%
CYP76
3.67%
NMT
3.63%
Other Families
62.75%
More Families (95)
T3O
165
3.34%
UGT
152
3.08%
UFGT
142
2.88%
7DLGT
140
2.84%
F3H
127
2.57%
DWF4/CYP90B1
103
2.09%
CAS
100
2.03%
CAD
96
1.95%
BR6OX2/CYP85A2
89
1.8%
STR
85
1.72%
CODM/T6ODM
82
1.66%
F3'H/CYP75B
77
1.56%
TRI/TRII
71
1.44%
SMT1/SMT2/SMT3
71
1.44%
SGD
63
1.28%
CYP71
61
1.24%
IFR
58
1.18%
LAC
53
1.07%
H6H
52
1.05%
GS
51
1.03%
GES
50
1.01%
TPS
50
1.01%
COMT
47
0.95%
CYP90D1
47
0.95%
PYKS
45
0.91%
HCT
45
0.91%
CSE
45
0.91%
IO
38
0.77%
PMT
37
0.75%
RAS
36
0.73%
ANR
34
0.69%
TAT
32
0.65%
CNMT
30
0.61%
16OMT
29
0.59%
FNS
29
0.59%
T16H
27
0.55%
BBE
27
0.55%
NCS
26
0.53%
CPD/CYP90A1
26
0.53%
8HGO
24
0.49%
SLS
24
0.49%
LAMT
24
0.49%
7DLH
23
0.47%
COR
23
0.47%
CCR
23
0.47%
BR6OX1/CYP85A1
23
0.47%
PAL
21
0.43%
G8O/G8H
20
0.41%
CPR
19
0.39%
F3'5'H/CYP75A
18
0.36%
SQS/FDFT1
17
0.34%
FPPS
16
0.32%
F5H/CYP84A
14
0.28%
ROT3/CYP90C1
14
0.28%
CCoAOMT
13
0.26%
CYP719
12
0.24%
CHS
12
0.24%
CYP51G1
12
0.24%
DXS
12
0.24%
GGPPS
11
0.22%
MVD
11
0.22%
AACT
11
0.22%
TYDC_DDC
9
0.18%
ANS/LDOX
9
0.18%
DFR
9
0.18%
SQE
9
0.18%
MVK
9
0.18%
MPO
8
0.16%
ISY
8
0.16%
TDC
8
0.16%
FLS
8
0.16%
SMO1/SMO2
7
0.14%
DET2
7
0.14%
HDS/IspG
7
0.14%
CHI
6
0.12%
DWF1
6
0.12%
PMK
5
0.1%
HMGR
4
0.08%
MCT/IspD
4
0.08%
CYP80B1
3
0.06%
HPPR
3
0.06%
CPI1
3
0.06%
HYD1
3
0.06%
DXR
3
0.06%
HMGS
3
0.06%
CMK/IspE
3
0.06%
IDI
3
0.06%
HDR/IspH
3
0.06%
ADC
2
0.04%
DWF5
2
0.04%
DWF7
2
0.04%
MDS/IspF
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
FK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 583 | 19 | BAHD (233) | View species results |
| Alkaloid pathway | 507 | 21 | NMT (109) | View species results |
| Phenylpropanoid pathway | 437 | 11 | POD (193) | View species results |
| Flavonoid pathway | 241 | 9 | UFGT (141) | View species results |
| Steroid pathway | 178 | 12 | CAS (88) | View species results |
| Rosmarinic acid pathway | 159 | 7 | C4H (59) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1725 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 358 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| juglans_microcarpa_x_regia_XP_041024585.1 | Alkaloid | STR | medium | pass |
| juglans_microcarpa_x_regia_XP_041024586.1 | Alkaloid | STR | medium | pass |
| juglans_microcarpa_x_regia_XP_041024888.1 | Alkaloid | STR | low | borderline |
| juglans_microcarpa_x_regia_XP_041025459.1 | Alkaloid | STR | low | borderline |
| juglans_microcarpa_x_regia_XP_041025664.1 | Alkaloid | STR | low | borderline |
| juglans_microcarpa_x_regia_XP_041025830.1 | Alkaloid | STR | medium | pass |
| juglans_microcarpa_x_regia_XP_041027885.1 | Alkaloid | STR | low | borderline |
| juglans_microcarpa_x_regia_XP_040985896.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040986271.1 | Alkaloid | T16H | medium | pass |
| juglans_microcarpa_x_regia_XP_040986392.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040987575.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040988056.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040988468.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040988476.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040988477.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040991956.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040991957.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040993794.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040994985.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040995034.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040995042.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040997513.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040998361.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040999525.1 | Alkaloid | T16H | low | borderline |
| juglans_microcarpa_x_regia_XP_040999552.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041002285.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041009708.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041009730.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041011412.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041011416.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041011428.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041013093.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041014455.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_041014456.1 | Alkaloid | T16H | medium | borderline |
| juglans_microcarpa_x_regia_XP_040985635.1 | Alkaloid | T3O | medium | pass |
| juglans_microcarpa_x_regia_XP_040985699.1 | Alkaloid | T3O | low | borderline |
| juglans_microcarpa_x_regia_XP_040985756.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040985779.1 | Alkaloid | T3O | medium | pass |
| juglans_microcarpa_x_regia_XP_040985809.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040985810.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040985922.1 | Alkaloid | T3O | medium | pass |
| juglans_microcarpa_x_regia_XP_040986029.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040986237.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040986246.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040986252.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040986280.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040987266.1 | Alkaloid | T3O | medium | pass |
| juglans_microcarpa_x_regia_XP_040987308.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040987310.1 | Alkaloid | T3O | medium | borderline |
| juglans_microcarpa_x_regia_XP_040987826.1 | Alkaloid | T3O | medium | borderline |