Jungermannia erectum (jungermannia_erectum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 24.95% Phenylpropanoid pathway 23.58% Alkaloid pathway 20.43% Flavonoid pathway 14.34% Rosmarinic acid pathway 9.82% Steroid pathway 6.88%

Family Distribution

509 Candidate Genes

C4H 7.12% NMT 5.86% BAHD 5.79% 4CL 4.9% C3'H/CYP98A 4.53% POD 4.23% CYP76 4.15% STR 3.56%

Other Families 59.87%

More Families (94)

F3H 32 2.37% BR6OX2/CYP85A2 32 2.37% UGT 32 2.37% IFR 31 2.3% UFGT 30 2.23% 7DLGT 29 2.15% IFS 29 2.15% T3O 26 1.93% GS 24 1.78% PAL 24 1.78% F3'H/CYP75B 21 1.56% COMT 21 1.56% PYKS 19 1.41% H6H 18 1.34% SMT1/SMT2/SMT3 18 1.34% TRI/TRII 17 1.26% DWF4/CYP90B1 17 1.26% RAS 16 1.19% CHS 15 1.11% CSE 15 1.11% CAD 15 1.11% IO 14 1.04% HCT 13 0.96% CODM/T6ODM 12 0.89% CYP719 11 0.82% F3'5'H/CYP75A 11 0.82% BR6OX1/CYP85A1 11 0.82% CAS 10 0.74% CYP71 10 0.74% T16H 9 0.67% NCS 8 0.59% FNS 8 0.59% GGPPS 8 0.59% CNMT 7 0.52% COR 7 0.52% ANR 7 0.52% CCR 7 0.52% CPD/CYP90A1 7 0.52% CYP80B1 6 0.45% PMT 6 0.45% SGD 6 0.45% GES 6 0.45% SLS 6 0.45% LAC 6 0.45% CYP51G1 6 0.45% TPS 6 0.45% 16OMT 5 0.37% G8O/G8H 5 0.37% CYP90D1 5 0.37% SMO1/SMO2 5 0.37% 8HGO 4 0.3% DFR 4 0.3% CPR 4 0.3% SQE 4 0.3% DXS 4 0.3% AACT 4 0.3% TDC 3 0.22% ADC 3 0.22% LAMT 3 0.22% ISY 3 0.22% CHI 3 0.22% ANS/LDOX 3 0.22% F5H/CYP84A 3 0.22% HPPR 3 0.22% SQS/FDFT1 3 0.22% DET2 3 0.22% BBE 2 0.15% 6OMT_4OMT_SOMT 2 0.15% MPO 2 0.15% FLS 2 0.15% CCoAOMT 2 0.15% TAT 2 0.15% DWF1 2 0.15% DWF7 2 0.15% DXR 2 0.15% MVK 2 0.15% IDI 2 0.15% HMGS 2 0.15% HMGR 2 0.15% FPPS 2 0.15% MVD 2 0.15% MCT/IspD 2 0.15% 7DLH 1 0.07% TYDC_DDC 1 0.07% HYD1 1 0.07% CPI1 1 0.07% FK 1 0.07% ROT3/CYP90C1 1 0.07% DWF5 1 0.07% CMK/IspE 1 0.07% PMK 1 0.07% HDR/IspH 1 0.07% MDS/IspF 1 0.07% HDS/IspG 1 0.07%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	127	19	BAHD (50)	View species results
Phenylpropanoid pathway	120	11	POD (52)	View species results
Alkaloid pathway	104	16	NMT (15)	View species results
Flavonoid pathway	73	9	UFGT (27)	View species results
Rosmarinic acid pathway	50	7	C4H (20)	View species results
Steroid pathway	35	11	CAS (10)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	444	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	107	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: TRI/TRII

Gene	Pathway	Family	Confidence	Status	Best Target
JereHiC_scaffold_10013660	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
JereHiC_scaffold_10037060	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
JereHiC_scaffold_10037090	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
JereHiC_scaffold_20077300	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
JereHiC_scaffold_30123500	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
JereHiC_scaffold_40133620	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
JereHiC_scaffold_50143600	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
JereHiC_scaffold_50169740	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
JereHiC_scaffold_50174150	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
JereHiC_scaffold_60196200	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
JereHiC_scaffold_60196510	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
JereHiC_scaffold_70219990	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
JereHiC_scaffold_70221080	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
JereHiC_scaffold_70247070	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
JereHiC_scaffold_80272080	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
JereHiC_scaffold_80274470	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
JereHiC_scaffold_80281110	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB