Lactuca sativa (lactuca_sativa)
Imported from atlas release summary for Lactuca sativa.
3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8379
Family-Level Calls
C4H
6.97%
C3'H/CYP98A
6.72%
BAHD
5.92%
CYP76
4.34%
IFS
3.99%
T3O
3.88%
POD
3.82%
4CL
3.8%
Other Families
60.57%
More Families (96)
UGT
274
3.27%
UFGT
262
3.13%
7DLGT
261
3.11%
DWF4/CYP90B1
223
2.66%
F3H
183
2.18%
F3'H/CYP75B
181
2.16%
SMT1/SMT2/SMT3
163
1.95%
STR
156
1.86%
NMT
155
1.85%
BR6OX2/CYP85A2
154
1.84%
CYP71
134
1.6%
CODM/T6ODM
124
1.48%
CAS
124
1.48%
TRI/TRII
118
1.41%
CAD
116
1.38%
GES
109
1.3%
TPS
109
1.3%
H6H
93
1.11%
CYP90D1
85
1.01%
LAC
81
0.97%
CSE
79
0.94%
GS
77
0.92%
T16H
76
0.91%
F3'5'H/CYP75A
75
0.9%
TAT
72
0.86%
PYKS
66
0.79%
SGD
65
0.78%
G8O/G8H
63
0.75%
BBE
62
0.74%
IFR
62
0.74%
SLS
59
0.7%
7DLH
53
0.63%
NCS
52
0.62%
CYP51G1
49
0.58%
CPD/CYP90A1
49
0.58%
FNS
48
0.57%
HCT
47
0.56%
IO
46
0.55%
COMT
44
0.53%
8HGO
41
0.49%
ANS/LDOX
40
0.48%
RAS
40
0.48%
MPO
37
0.44%
F5H/CYP84A
35
0.42%
CPR
35
0.42%
ANR
32
0.38%
PAL
30
0.36%
16OMT
29
0.35%
PMT
26
0.31%
CCoAOMT
23
0.27%
CCR
22
0.26%
CYP719
21
0.25%
BR6OX1/CYP85A1
21
0.25%
CHS
19
0.23%
HPPR
19
0.23%
FPPS
19
0.23%
COR
18
0.21%
CYP80B1
16
0.19%
CNMT
16
0.19%
HDR/IspH
16
0.19%
LAMT
15
0.18%
DET2
15
0.18%
ROT3/CYP90C1
15
0.18%
HMGR
15
0.18%
TYDC_DDC
14
0.17%
SQS/FDFT1
13
0.16%
ISY
12
0.14%
MVD
12
0.14%
AACT
12
0.14%
HDS/IspG
10
0.12%
GGPPS
10
0.12%
SQE
9
0.11%
TDC
8
0.1%
DFR
8
0.1%
FLS
8
0.1%
DXS
8
0.1%
IDI
8
0.1%
MVK
8
0.1%
XMT_MXMT_DXMT
6
0.07%
CHI
6
0.07%
GPPS
6
0.07%
SMO1/SMO2
5
0.06%
HMGS
5
0.06%
PMK
5
0.06%
ADC
4
0.05%
6OMT_4OMT_SOMT
4
0.05%
FK
4
0.05%
MCT/IspD
4
0.05%
CPI1
3
0.04%
DWF7
3
0.04%
DWF1
3
0.04%
DXR
3
0.04%
CMK/IspE
3
0.04%
MDS/IspF
3
0.04%
HYD1
2
0.02%
DWF5
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1017 | 19 | BAHD (403) | View species results |
| Alkaloid pathway | 700 | 24 | 7DLGT (155) | View species results |
| Phenylpropanoid pathway | 646 | 11 | POD (292) | View species results |
| Flavonoid pathway | 376 | 10 | UFGT (249) | View species results |
| Rosmarinic acid pathway | 314 | 7 | C4H (138) | View species results |
| Steroid pathway | 244 | 13 | SMT1/SMT2/SMT3 (116) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 3525 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 583 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lsat08G0019940.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat08G0019950.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat08G0019950.2 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat08G0029050.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat08G0040310.1 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lsat08G0040310.2 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lsat08G0042330.1 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lsat08G0045980.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0001820.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0004490.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0006660.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0006660.2 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0007970.1 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lsat09G0007970.2 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lsat09G0018860.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0023080.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0023100.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0023100.2 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0023100.3 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0028860.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0028860.2 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0028890.1 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lsat09G0028890.2 | Steroid | DWF4/CYP90B1 | low | borderline |