PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Lsat01G0002380.2 Alkaloid IO medium borderline
Lsat01G0005820.1 Alkaloid IO medium borderline
Lsat01G0005820.2 Alkaloid IO medium borderline
Lsat01G0007650.1 Alkaloid IO medium borderline
Lsat02G0005910.1 Alkaloid IO medium borderline
Lsat02G0005910.2 Alkaloid IO medium borderline
Lsat02G0007550.1 Alkaloid IO medium borderline
Lsat02G0007570.1 Alkaloid IO medium pass
Lsat02G0007790.1 Alkaloid IO medium pass
Lsat02G0013710.4 Alkaloid IO medium borderline
Lsat02G0032170.3 Alkaloid IO medium borderline
Lsat03G0016910.1 Alkaloid IO low borderline
Lsat03G0016910.2 Alkaloid IO low borderline
Lsat03G0016910.3 Alkaloid IO low borderline
Lsat03G0032160.1 Alkaloid IO medium pass
Lsat03G0036400.1 Alkaloid IO medium borderline
Lsat03G0036410.1 Alkaloid IO medium borderline
Lsat04G0000750.1 Alkaloid IO medium borderline
Lsat04G0017340.1 Alkaloid IO medium borderline
Lsat04G0034560.1 Alkaloid IO medium borderline
Lsat04G0034560.2 Alkaloid IO medium borderline
Lsat04G0034570.1 Alkaloid IO medium borderline
Lsat04G0034570.2 Alkaloid IO medium borderline
Lsat04G0035410.1 Alkaloid IO medium borderline
Lsat04G0051610.1 Alkaloid IO medium pass
Lsat05G0030990.1 Alkaloid IO low borderline
Lsat05G0031000.1 Alkaloid IO low borderline
Lsat06G0004630.1 Alkaloid IO medium borderline
Lsat06G0008690.1 Alkaloid IO medium borderline
Lsat06G0015520.2 Alkaloid IO medium pass
Lsat07G0000010.1 Alkaloid IO high pass
Lsat08G0019950.1 Alkaloid IO low borderline
Lsat08G0019950.2 Alkaloid IO low borderline
Lsat08G0022790.1 Alkaloid IO low borderline
Lsat08G0022790.2 Alkaloid IO low borderline
Lsat08G0022790.3 Alkaloid IO low borderline
Lsat08G0040310.1 Alkaloid IO medium borderline
Lsat08G0040310.2 Alkaloid IO medium borderline
Lsat09G0004480.2 Alkaloid IO medium borderline
Lsat09G0014240.1 Alkaloid IO medium borderline
Lsat09G0014240.2 Alkaloid IO medium borderline
Lsat09G0014250.1 Alkaloid IO medium borderline
Lsat09G0014280.1 Alkaloid IO medium borderline
Lsat09G0014480.2 Alkaloid IO medium borderline
Lsat09G0023000.1 Alkaloid IO low borderline
Lsat09G0023000.2 Alkaloid IO low borderline