PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Lsat00G0006330.1 Flavonoid F3H low borderline
Lsat01G0003970.1 Flavonoid F3H medium borderline
Lsat01G0003970.2 Flavonoid F3H medium borderline
Lsat01G0011640.1 Flavonoid F3H medium borderline
Lsat01G0011640.2 Flavonoid F3H medium borderline
Lsat01G0014630.1 Flavonoid F3H medium borderline
Lsat01G0014630.2 Flavonoid F3H low borderline
Lsat01G0034950.1 Flavonoid F3H medium borderline
Lsat01G0034950.2 Flavonoid F3H medium borderline
Lsat01G0034960.1 Flavonoid F3H medium borderline
Lsat01G0034970.1 Flavonoid F3H medium borderline
Lsat01G0034970.2 Flavonoid F3H medium borderline
Lsat01G0034980.1 Flavonoid F3H medium borderline
Lsat01G0036280.1 Flavonoid F3H medium borderline
Lsat01G0036370.1 Flavonoid F3H medium borderline
Lsat01G0036380.1 Flavonoid F3H medium borderline
Lsat01G0036410.1 Flavonoid F3H medium borderline
Lsat01G0036410.2 Flavonoid F3H medium borderline
Lsat02G0005130.1 Flavonoid F3H medium borderline
Lsat02G0005130.2 Flavonoid F3H medium borderline
Lsat02G0005210.1 Flavonoid F3H medium borderline
Lsat02G0005210.2 Flavonoid F3H medium borderline
Lsat02G0011130.1 Flavonoid F3H medium borderline
Lsat02G0011140.1 Flavonoid F3H medium borderline
Lsat02G0019500.1 Flavonoid F3H medium pass
Lsat02G0019500.2 Flavonoid F3H medium pass
Lsat02G0019510.1 Flavonoid F3H medium pass
Lsat02G0030850.1 Flavonoid F3H low borderline
Lsat02G0036550.1 Flavonoid F3H medium borderline
Lsat02G0039560.1 Flavonoid F3H medium pass
Lsat03G0000210.1 Flavonoid F3H low borderline
Lsat03G0000210.2 Flavonoid F3H low borderline
Lsat03G0022830.1 Flavonoid F3H medium borderline
Lsat03G0022830.2 Flavonoid F3H medium borderline
Lsat03G0023340.1 Flavonoid F3H low borderline
Lsat03G0026760.1 Flavonoid F3H low borderline
Lsat03G0026760.2 Flavonoid F3H low borderline
Lsat03G0026760.3 Flavonoid F3H low borderline
Lsat03G0030000.1 Flavonoid F3H medium borderline
Lsat03G0030030.1 Flavonoid F3H medium borderline
Lsat03G0030060.1 Flavonoid F3H medium borderline
Lsat03G0030060.2 Flavonoid F3H medium borderline
Lsat03G0032350.1 Flavonoid F3H medium borderline
Lsat03G0034700.1 Flavonoid F3H medium borderline
Lsat03G0034700.2 Flavonoid F3H medium borderline
Lsat03G0034880.1 Flavonoid F3H medium borderline
Lsat03G0035040.1 Flavonoid F3H medium borderline
Lsat03G0035040.2 Flavonoid F3H medium borderline
Lsat03G0035060.1 Flavonoid F3H medium borderline
Lsat03G0035060.2 Flavonoid F3H medium borderline