PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Lsat00G0001880.1 Alkaloid GS high pass
Lsat01G0002160.1 Alkaloid GS high pass
Lsat01G0002160.2 Alkaloid GS high pass
Lsat01G0028500.1 Alkaloid GS low borderline
Lsat01G0028500.2 Alkaloid GS low borderline
Lsat01G0028510.1 Alkaloid GS low borderline
Lsat01G0028510.2 Alkaloid GS low borderline
Lsat02G0002280.1 Alkaloid GS low borderline
Lsat02G0018400.1 Alkaloid GS high pass
Lsat02G0018410.1 Alkaloid GS high pass
Lsat02G0036130.3 Alkaloid GS medium pass
Lsat02G0038080.1 Alkaloid GS low borderline
Lsat02G0038090.1 Alkaloid GS low borderline
Lsat02G0038140.1 Alkaloid GS low borderline
Lsat02G0038170.1 Alkaloid GS low borderline
Lsat02G0038170.2 Alkaloid GS low borderline
Lsat02G0038180.1 Alkaloid GS low borderline
Lsat02G0038180.2 Alkaloid GS low borderline
Lsat02G0038190.1 Alkaloid GS low borderline
Lsat02G0038210.1 Alkaloid GS low borderline
Lsat02G0038210.2 Alkaloid GS low borderline
Lsat02G0038230.1 Alkaloid GS low borderline
Lsat02G0038230.2 Alkaloid GS low borderline
Lsat02G0038910.1 Alkaloid GS medium pass
Lsat02G0038910.2 Alkaloid GS medium pass
Lsat02G0038920.1 Alkaloid GS medium pass
Lsat03G0015460.1 Alkaloid GS low borderline
Lsat03G0019960.1 Alkaloid GS high pass
Lsat03G0019970.1 Alkaloid GS high pass
Lsat03G0019970.2 Alkaloid GS high pass
Lsat03G0019980.1 Alkaloid GS high pass
Lsat03G0019980.2 Alkaloid GS high pass
Lsat04G0000680.1 Alkaloid GS low borderline
Lsat04G0000680.2 Alkaloid GS low borderline
Lsat04G0010480.1 Alkaloid GS high pass
Lsat04G0010480.2 Alkaloid GS high pass
Lsat04G0010490.1 Alkaloid GS high pass
Lsat04G0016500.1 Alkaloid GS low borderline
Lsat04G0019210.1 Alkaloid GS high pass
Lsat04G0045900.1 Alkaloid GS high pass
Lsat05G0034020.1 Alkaloid GS low borderline
Lsat05G0034020.2 Alkaloid GS low borderline
Lsat05G0049140.1 Alkaloid GS low borderline
Lsat05G0049140.2 Alkaloid GS low borderline
Lsat05G0049150.1 Alkaloid GS low borderline
Lsat06G0019540.1 Alkaloid GS low borderline
Lsat06G0019540.2 Alkaloid GS low borderline
Lsat06G0019540.3 Alkaloid GS low borderline
Lsat06G0028120.2 Alkaloid GS low borderline
Lsat07G0015250.3 Alkaloid GS low borderline