PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Lsat05G0016100.1 Alkaloid T3O medium borderline
Lsat05G0016100.2 Alkaloid T3O medium borderline
Lsat05G0016870.1 Alkaloid T3O medium borderline
Lsat05G0016870.2 Alkaloid T3O medium borderline
Lsat05G0017240.1 Alkaloid T3O medium borderline
Lsat05G0017240.2 Alkaloid T3O medium borderline
Lsat05G0021150.1 Alkaloid T3O medium pass
Lsat05G0021210.1 Alkaloid T3O medium pass
Lsat05G0021210.2 Alkaloid T3O medium pass
Lsat05G0021280.1 Alkaloid T3O medium pass
Lsat05G0021290.1 Alkaloid T3O medium pass
Lsat05G0030540.1 Alkaloid T3O medium pass
Lsat05G0030540.2 Alkaloid T3O medium pass
Lsat05G0032160.1 Alkaloid T3O low borderline
Lsat05G0032160.2 Alkaloid T3O medium pass
Lsat05G0035350.1 Alkaloid T3O medium pass
Lsat05G0035350.2 Alkaloid T3O medium pass
Lsat05G0036400.1 Alkaloid T3O medium borderline
Lsat05G0036400.2 Alkaloid T3O medium borderline
Lsat05G0038310.1 Alkaloid T3O medium borderline
Lsat05G0038310.2 Alkaloid T3O medium borderline
Lsat05G0041810.1 Alkaloid T3O medium borderline
Lsat05G0041810.2 Alkaloid T3O medium borderline
Lsat05G0050670.1 Alkaloid T3O low borderline
Lsat06G0002750.1 Alkaloid T3O medium pass
Lsat06G0002750.2 Alkaloid T3O medium pass
Lsat06G0015450.2 Alkaloid T3O medium borderline
Lsat06G0015450.3 Alkaloid T3O medium borderline
Lsat06G0015460.1 Alkaloid T3O medium borderline
Lsat06G0015470.1 Alkaloid T3O medium borderline
Lsat06G0015480.1 Alkaloid T3O medium borderline
Lsat06G0015500.1 Alkaloid T3O medium borderline
Lsat06G0015500.2 Alkaloid T3O medium borderline
Lsat06G0015510.1 Alkaloid T3O medium borderline
Lsat06G0026020.2 Alkaloid T3O medium borderline
Lsat06G0026030.1 Alkaloid T3O medium borderline
Lsat06G0026040.1 Alkaloid T3O medium borderline
Lsat06G0026050.1 Alkaloid T3O medium borderline
Lsat06G0026050.2 Alkaloid T3O medium borderline
Lsat06G0026060.1 Alkaloid T3O medium borderline
Lsat06G0026070.1 Alkaloid T3O medium borderline
Lsat06G0026070.2 Alkaloid T3O medium borderline
Lsat06G0026110.2 Alkaloid T3O medium borderline
Lsat06G0026110.3 Alkaloid T3O medium borderline
Lsat06G0029500.1 Alkaloid T3O medium borderline
Lsat06G0029520.1 Alkaloid T3O medium borderline
Lsat06G0029530.1 Alkaloid T3O medium borderline
Lsat06G0029530.2 Alkaloid T3O medium borderline
Lsat06G0029540.1 Alkaloid T3O medium borderline
Lsat06G0029540.2 Alkaloid T3O medium borderline