PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
Lsat00G0000700.1 Alkaloid TRI/TRII medium pass
Lsat00G0000700.2 Alkaloid TRI/TRII medium pass
Lsat00G0001030.1 Alkaloid TRI/TRII low borderline
Lsat00G0001030.2 Alkaloid TRI/TRII low borderline
Lsat01G0003550.1 Alkaloid TRI/TRII medium pass
Lsat01G0010160.1 Alkaloid TRI/TRII low borderline
Lsat01G0019480.1 Alkaloid TRI/TRII medium pass
Lsat01G0019480.2 Alkaloid TRI/TRII medium pass
Lsat01G0019490.1 Alkaloid TRI/TRII medium pass
Lsat01G0019490.2 Alkaloid TRI/TRII medium pass
Lsat01G0019490.3 Alkaloid TRI/TRII medium pass
Lsat01G0019510.1 Alkaloid TRI/TRII medium pass
Lsat01G0019510.2 Alkaloid TRI/TRII medium pass
Lsat01G0019510.3 Alkaloid TRI/TRII medium pass
Lsat01G0019530.1 Alkaloid TRI/TRII medium pass
Lsat01G0019530.2 Alkaloid TRI/TRII medium pass
Lsat01G0019540.1 Alkaloid TRI/TRII medium pass
Lsat01G0019540.2 Alkaloid TRI/TRII medium pass
Lsat01G0019540.3 Alkaloid TRI/TRII medium pass
Lsat01G0019550.1 Alkaloid TRI/TRII medium pass
Lsat01G0019550.2 Alkaloid TRI/TRII medium pass
Lsat01G0019550.3 Alkaloid TRI/TRII medium pass
Lsat02G0017420.1 Alkaloid TRI/TRII low borderline
Lsat02G0017420.2 Alkaloid TRI/TRII low borderline
Lsat02G0017430.1 Alkaloid TRI/TRII low borderline
Lsat02G0023410.1 Alkaloid TRI/TRII medium pass
Lsat02G0030610.1 Alkaloid TRI/TRII medium pass
Lsat03G0011080.1 Alkaloid TRI/TRII medium pass
Lsat03G0011080.2 Alkaloid TRI/TRII medium pass
Lsat03G0011080.3 Alkaloid TRI/TRII medium pass
Lsat03G0011090.2 Alkaloid TRI/TRII low borderline
Lsat03G0015390.1 Alkaloid TRI/TRII low borderline
Lsat03G0031050.1 Alkaloid TRI/TRII medium pass
Lsat04G0007730.1 Alkaloid TRI/TRII low borderline
Lsat04G0010790.1 Alkaloid TRI/TRII low borderline
Lsat04G0014930.1 Alkaloid TRI/TRII medium pass
Lsat04G0014930.2 Alkaloid TRI/TRII medium pass
Lsat04G0014940.1 Alkaloid TRI/TRII medium pass
Lsat04G0014960.1 Alkaloid TRI/TRII medium pass
Lsat04G0014960.2 Alkaloid TRI/TRII medium pass
Lsat04G0014960.3 Alkaloid TRI/TRII medium pass
Lsat04G0021940.1 Alkaloid TRI/TRII low borderline
Lsat05G0005200.1 Alkaloid TRI/TRII medium pass
Lsat05G0012590.1 Alkaloid TRI/TRII medium pass
Lsat05G0023030.1 Alkaloid TRI/TRII low borderline
Lsat05G0023030.2 Alkaloid TRI/TRII medium pass
Lsat05G0023080.1 Alkaloid TRI/TRII medium pass
Lsat05G0023090.2 Alkaloid TRI/TRII low borderline
Lsat05G0023090.3 Alkaloid TRI/TRII low borderline
Lsat05G0023110.1 Alkaloid TRI/TRII medium pass