PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lsat04G0035200.2 Steroid CYP90D1 low borderline
Lsat04G0035210.1 Steroid CYP90D1 low borderline
Lsat04G0035220.1 Steroid CYP90D1 low borderline
Lsat04G0035230.1 Steroid CYP90D1 low borderline
Lsat04G0042890.1 Steroid CYP90D1 low borderline
Lsat05G0021150.1 Steroid CYP90D1 medium borderline
Lsat05G0021210.2 Steroid CYP90D1 medium borderline
Lsat05G0030990.1 Steroid CYP90D1 low borderline
Lsat05G0032160.1 Steroid CYP90D1 medium borderline
Lsat05G0032160.2 Steroid CYP90D1 medium borderline
Lsat05G0035350.3 Steroid CYP90D1 medium borderline
Lsat05G0035980.1 Steroid CYP90D1 medium borderline
Lsat05G0035980.2 Steroid CYP90D1 medium borderline
Lsat06G0008690.1 Steroid CYP90D1 low borderline
Lsat06G0032880.1 Steroid CYP90D1 low borderline
Lsat06G0032880.2 Steroid CYP90D1 low borderline
Lsat07G0002440.1 Steroid CYP90D1 low borderline
Lsat07G0002440.2 Steroid CYP90D1 low borderline
Lsat07G0002490.1 Steroid CYP90D1 low borderline
Lsat07G0020220.1 Steroid CYP90D1 low borderline
Lsat08G0003890.1 Steroid CYP90D1 low borderline
Lsat08G0004710.1 Steroid CYP90D1 medium borderline
Lsat08G0004710.2 Steroid CYP90D1 medium borderline
Lsat08G0024680.1 Steroid CYP90D1 low borderline
Lsat08G0043340.1 Steroid CYP90D1 low borderline
Lsat08G0046020.1 Steroid CYP90D1 low borderline
Lsat09G0004480.1 Steroid CYP90D1 low borderline
Lsat09G0004480.2 Steroid CYP90D1 low borderline
Lsat09G0009010.1 Steroid CYP90D1 low borderline
Lsat09G0009030.1 Steroid CYP90D1 low borderline
Lsat09G0009050.1 Steroid CYP90D1 low borderline
Lsat09G0014480.1 Steroid CYP90D1 low borderline
Lsat09G0014480.2 Steroid CYP90D1 low borderline
Lsat09G0020250.1 Steroid CYP90D1 medium borderline
Lsat09G0020250.2 Steroid CYP90D1 medium borderline
Lsat00G0000040.1 Steroid DET2 low borderline
Lsat00G0000040.2 Steroid DET2 low borderline
Lsat02G0030820.1 Steroid DET2 low borderline
Lsat02G0030820.2 Steroid DET2 low borderline
Lsat02G0030830.2 Steroid DET2 low borderline
Lsat02G0030830.3 Steroid DET2 low borderline
Lsat02G0030830.5 Steroid DET2 low borderline
Lsat02G0035170.1 Steroid DET2 low borderline
Lsat02G0035170.2 Steroid DET2 low borderline
Lsat05G0042160.1 Steroid DET2 medium pass
Lsat08G0007930.2 Steroid DET2 low borderline
Lsat08G0008270.1 Steroid DET2 low borderline
Lsat08G0008280.1 Steroid DET2 low borderline
Lsat08G0008280.2 Steroid DET2 low borderline
Lsat08G0019440.1 Steroid DET2 low borderline