PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat04G0028010.1 Flavonoid F3H low borderline
Lsat04G0028020.1 Flavonoid F3H low borderline
Lsat04G0029210.1 Flavonoid F3H low borderline
Lsat04G0029210.2 Flavonoid F3H low borderline
Lsat04G0030010.1 Flavonoid F3H low borderline
Lsat04G0030040.1 Flavonoid F3H low borderline
Lsat04G0031040.1 Flavonoid F3H medium borderline
Lsat04G0031800.1 Flavonoid F3H medium borderline
Lsat05G0003160.1 Flavonoid F3H low borderline
Lsat05G0005770.1 Flavonoid F3H medium borderline
Lsat05G0005770.2 Flavonoid F3H medium borderline
Lsat05G0005780.1 Flavonoid F3H medium borderline
Lsat05G0005780.2 Flavonoid F3H medium borderline
Lsat05G0005780.3 Flavonoid F3H medium borderline
Lsat05G0018910.1 Flavonoid F3H medium borderline
Lsat05G0018960.1 Flavonoid F3H medium borderline
Lsat05G0018960.2 Flavonoid F3H medium borderline
Lsat05G0021470.1 Flavonoid F3H medium borderline
Lsat05G0021480.1 Flavonoid F3H medium borderline
Lsat05G0021790.1 Flavonoid F3H medium borderline
Lsat05G0024460.1 Flavonoid F3H medium borderline
Lsat05G0028680.1 Flavonoid F3H medium borderline
Lsat05G0028680.2 Flavonoid F3H medium borderline
Lsat05G0028680.3 Flavonoid F3H medium borderline
Lsat05G0028680.4 Flavonoid F3H medium borderline
Lsat05G0030880.1 Flavonoid F3H medium borderline
Lsat05G0030890.1 Flavonoid F3H medium borderline
Lsat05G0032720.1 Flavonoid F3H medium borderline
Lsat05G0032810.1 Flavonoid F3H medium borderline
Lsat05G0033250.1 Flavonoid F3H medium pass
Lsat05G0034980.1 Flavonoid F3H medium borderline
Lsat05G0034980.2 Flavonoid F3H medium borderline
Lsat05G0035010.1 Flavonoid F3H low borderline
Lsat05G0035020.3 Flavonoid F3H medium pass
Lsat05G0035040.1 Flavonoid F3H low borderline
Lsat05G0035040.2 Flavonoid F3H low borderline
Lsat05G0035060.1 Flavonoid F3H low borderline
Lsat05G0035060.2 Flavonoid F3H low borderline
Lsat05G0035090.1 Flavonoid F3H low borderline
Lsat05G0035090.2 Flavonoid F3H low borderline
Lsat05G0035120.1 Flavonoid F3H low borderline
Lsat05G0035120.2 Flavonoid F3H low borderline
Lsat05G0036360.1 Flavonoid F3H medium borderline
Lsat05G0036360.2 Flavonoid F3H medium borderline
Lsat05G0037290.1 Flavonoid F3H medium borderline
Lsat05G0040340.1 Flavonoid F3H medium borderline
Lsat05G0050420.1 Flavonoid F3H medium borderline
Lsat05G0050420.2 Flavonoid F3H medium borderline
Lsat06G0004720.1 Flavonoid F3H medium borderline
Lsat06G0015780.1 Flavonoid F3H medium borderline