PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lsat08G0042440.1 Alkaloid G8O/G8H medium borderline
Lsat08G0042450.2 Alkaloid G8O/G8H medium pass
Lsat08G0043000.1 Alkaloid G8O/G8H medium borderline
Lsat08G0043000.2 Alkaloid G8O/G8H low borderline
Lsat08G0043030.1 Alkaloid G8O/G8H medium borderline
Lsat08G0043030.2 Alkaloid G8O/G8H medium borderline
Lsat08G0043100.1 Alkaloid G8O/G8H medium borderline
Lsat08G0043100.2 Alkaloid G8O/G8H medium borderline
Lsat08G0043320.1 Alkaloid G8O/G8H medium pass
Lsat08G0043340.1 Alkaloid G8O/G8H medium borderline
Lsat09G0004480.1 Alkaloid G8O/G8H medium borderline
Lsat09G0014480.1 Alkaloid G8O/G8H medium borderline
Lsat00G0004570.1 Alkaloid GES medium pass
Lsat01G0001500.1 Alkaloid GES medium pass
Lsat01G0001500.2 Alkaloid GES medium pass
Lsat01G0001540.1 Alkaloid GES medium pass
Lsat01G0001540.2 Alkaloid GES medium pass
Lsat01G0027880.1 Alkaloid GES medium pass
Lsat01G0035720.1 Alkaloid GES medium pass
Lsat01G0035720.2 Alkaloid GES medium pass
Lsat01G0035720.3 Alkaloid GES medium pass
Lsat01G0037750.1 Alkaloid GES medium pass
Lsat01G0037810.1 Alkaloid GES medium pass
Lsat01G0037810.2 Alkaloid GES medium pass
Lsat01G0037820.1 Alkaloid GES medium pass
Lsat01G0037820.2 Alkaloid GES medium pass
Lsat01G0037820.3 Alkaloid GES medium pass
Lsat01G0037910.1 Alkaloid GES medium pass
Lsat01G0038750.1 Alkaloid GES medium pass
Lsat01G0038750.2 Alkaloid GES medium pass
Lsat02G0007820.1 Alkaloid GES medium pass
Lsat02G0008120.1 Alkaloid GES medium pass
Lsat02G0008120.2 Alkaloid GES medium pass
Lsat02G0008140.1 Alkaloid GES medium pass
Lsat02G0008140.2 Alkaloid GES medium pass
Lsat02G0021450.1 Alkaloid GES low borderline
Lsat02G0032130.1 Alkaloid GES medium pass
Lsat02G0032130.2 Alkaloid GES medium pass
Lsat02G0032130.3 Alkaloid GES medium pass
Lsat03G0006550.1 Alkaloid GES medium pass
Lsat03G0006550.2 Alkaloid GES medium pass
Lsat03G0021380.1 Alkaloid GES medium pass
Lsat04G0009650.1 Alkaloid GES medium pass
Lsat04G0016930.1 Alkaloid GES medium pass
Lsat04G0016930.2 Alkaloid GES medium pass
Lsat04G0016930.3 Alkaloid GES medium pass
Lsat04G0016960.1 Alkaloid GES medium pass
Lsat04G0016960.2 Alkaloid GES medium pass
Lsat04G0016960.3 Alkaloid GES medium pass
Lsat04G0016990.1 Alkaloid GES medium pass