PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat07G0002620.1 Rosmarinic Acid HPPR medium pass
Lsat02G0011180.1 Rosmarinic Acid PAL medium pass
Lsat02G0031520.1 Rosmarinic Acid PAL high pass
Lsat02G0031530.1 Rosmarinic Acid PAL high pass
Lsat06G0009000.1 Rosmarinic Acid PAL high pass
Lsat06G0009000.2 Rosmarinic Acid PAL high pass
Lsat06G0009020.1 Rosmarinic Acid PAL high pass
Lsat07G0019240.1 Rosmarinic Acid PAL low borderline
Lsat09G0022660.1 Rosmarinic Acid PAL high pass
Lsat09G0022660.2 Rosmarinic Acid PAL high pass
Lsat09G0022660.3 Rosmarinic Acid PAL high pass
Lsat00G0000960.1 Rosmarinic Acid RAS medium pass
Lsat00G0000960.2 Rosmarinic Acid RAS medium pass
Lsat01G0018560.1 Rosmarinic Acid RAS medium borderline
Lsat01G0018560.2 Rosmarinic Acid RAS medium borderline
Lsat01G0023750.1 Rosmarinic Acid RAS low borderline
Lsat01G0023750.2 Rosmarinic Acid RAS low borderline
Lsat01G0023780.1 Rosmarinic Acid RAS low borderline
Lsat01G0023790.1 Rosmarinic Acid RAS low borderline
Lsat02G0012090.1 Rosmarinic Acid RAS low borderline
Lsat02G0020490.1 Rosmarinic Acid RAS low borderline
Lsat02G0020490.2 Rosmarinic Acid RAS low borderline
Lsat03G0022430.1 Rosmarinic Acid RAS low borderline
Lsat04G0011630.1 Rosmarinic Acid RAS low borderline
Lsat04G0011630.2 Rosmarinic Acid RAS low borderline
Lsat04G0021990.1 Rosmarinic Acid RAS low borderline
Lsat04G0021990.2 Rosmarinic Acid RAS low borderline
Lsat04G0024930.1 Rosmarinic Acid RAS medium pass
Lsat04G0024930.2 Rosmarinic Acid RAS medium pass
Lsat05G0002570.1 Rosmarinic Acid RAS medium pass
Lsat05G0002570.2 Rosmarinic Acid RAS medium pass
Lsat05G0007500.1 Rosmarinic Acid RAS low borderline
Lsat05G0020990.1 Rosmarinic Acid RAS medium pass
Lsat05G0023370.1 Rosmarinic Acid RAS medium borderline
Lsat05G0023370.2 Rosmarinic Acid RAS medium borderline
Lsat06G0030720.1 Rosmarinic Acid RAS low borderline
Lsat06G0030720.2 Rosmarinic Acid RAS low borderline
Lsat07G0013440.1 Rosmarinic Acid RAS low borderline
Lsat07G0013440.2 Rosmarinic Acid RAS low borderline
Lsat07G0013740.1 Rosmarinic Acid RAS medium pass
Lsat07G0015940.1 Rosmarinic Acid RAS medium pass
Lsat08G0019780.1 Rosmarinic Acid RAS medium pass
Lsat08G0019780.2 Rosmarinic Acid RAS medium pass
Lsat08G0021950.1 Rosmarinic Acid RAS medium pass
Lsat08G0021950.2 Rosmarinic Acid RAS medium pass
Lsat08G0027620.2 Rosmarinic Acid RAS low borderline
Lsat08G0041410.1 Rosmarinic Acid RAS low borderline
Lsat08G0042500.1 Rosmarinic Acid RAS low borderline
Lsat09G0002150.1 Rosmarinic Acid RAS low borderline
Lsat09G0008260.1 Rosmarinic Acid RAS low borderline